Cronobacter dublinensis: AFK67_15515
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Entry
AFK67_15515 CDS
T04061
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cdm
Cronobacter dublinensis
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdm03009
]
AFK67_15515 (rluD)
Enzymes [BR:
cdm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AFK67_15515 (rluD)
Ribosome biogenesis [BR:
cdm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AFK67_15515 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
Motif
Other DBs
NCBI-ProteinID:
ALB67803
LinkDB
All DBs
Position
complement(3377141..3378121)
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AA seq
326 aa
AA seq
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MAQRVQLTATVSESQLGQRLDQALAELFPDYSRSRIKEWILDQRVLVNGQMCDTPKEKVL
GGERVAINAEIEEEARFEPQDIPLDIVYEDDDILVINKPRDFVVHPGAGNPDGTVLNALL
HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVEALQLREITREYEAVAIGHMT
AGGTVSEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRIHTRLRLRLETGRTHQIRVHM
AHITHPLVGDQLYGGRPRPPKGASEAFIQALRQFDRQALHATMLRLYHPISGVMMEWHAP
IPQDMIDLIDALRADFEAHKDDVDWL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacgagtacaactcaccgcaacggtgtccgagtcacagctcggtcaacgctta
gatcaggctttggccgaattgttcccggattattcacgttcacgcataaaagaatggatc
cttgaccagcgcgtactggttaacggccagatgtgtgatacgccgaaagagaaagtgttg
ggtggagaacgtgtcgccatcaatgctgaaattgaagaagaagcgcgctttgaaccgcag
gatatcccgctggatatcgtctacgaagatgacgatatcctcgtcattaataagccgcgc
gatttcgtcgtacatcctggtgccggtaacccggacggcaccgtgctgaacgcgctgctg
cactattatccgccgattgccgacgtgccgcgcgcgggtatcgtgcatcgtctggataaa
gacaccacgggtctgatggtcgtggcgaaaaccgttccggcgcagacgcgtctggtcgag
gcgttgcagctgcgtgaaatcacccgtgaatatgaggcggtcgctatcggtcatatgacg
gcgggcggtacggtcagcgagcctatcagccgccacccgaccaagcgcacccatatgtcg
gttcacccgatgggtaaaccggcggtgacgcattaccgcatcatggagcattttcggatt
cacacccgcctgcgtctgcgtctggaaactggccgtacccaccagatccgcgtacacatg
gcgcatattacccatccgctggtgggcgatcagctctatggcggacgcccgcgcccgccg
aaaggcgcaagcgaggcgtttatccaggcgctgcgtcaattcgaccgtcaggcgctgcac
gcaacgatgctgcgcctctatcaccccattagcggcgtgatgatggaatggcacgcgcct
atcccgcaggatatgatcgacttaatcgatgcgctgcgcgccgatttcgaagcccataaa
gacgacgtggactggttatga
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