Corynebacterium diphtheriae VA01: CDVA01_0256
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Entry
CDVA01_0256 CDS
T01702
Symbol
rmlB
Name
(GenBank) dTDP-glucose or rhamnose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cdv
Corynebacterium diphtheriae VA01
Pathway
cdv00521
Streptomycin biosynthesis
cdv00523
Polyketide sugar unit biosynthesis
cdv00525
Acarbose and validamycin biosynthesis
cdv00541
O-Antigen nucleotide sugar biosynthesis
cdv01100
Metabolic pathways
cdv01110
Biosynthesis of secondary metabolites
cdv01250
Biosynthesis of nucleotide sugars
Module
cdv_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cdv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CDVA01_0256 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CDVA01_0256 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
CDVA01_0256 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CDVA01_0256 (rmlB)
00525 Acarbose and validamycin biosynthesis
CDVA01_0256 (rmlB)
Enzymes [BR:
cdv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CDVA01_0256 (rmlB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AEX82525
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Position
complement(272664..273656)
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AA seq
330 aa
AA seq
DB search
MLVTGGAGFIGSNFVRRVLATRPEYRVTVLDKLTYAGNAANLDGCDATLVVGDICDAQLV
DRLVADSDVVVHFAAESHNDNSLVDPSPFVQTNVVGTFTLLEAARRHDVRFHHVSTDEVF
GDLELDDPNRFTEHTPYNPSSPYSATKAGSDHLVRAWVRSFGLRATISHCSNNYGPYQHI
EKFIPRQITNILSGLTPKLYGTGEQVRDWIHVDDHNDAVIRILESGRIGQTYIIGADNDH
VNNKTVITLICELMGADGFEHVADRPGHDMRYAMDSSTLRAELGWQPRFTDTDTGMREGL
LQTIEWYRTHRDWWEPQKAAVEQRYLAQGH
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcaccggcggcgccggttttattggttcgaattttgtcaggcgtgttcttgct
acccgtccggagtatcgggtcacggtactagataagctgacgtatgccggcaacgccgca
aatttggatggctgtgatgccactttggttgtgggcgatatttgtgatgcacagttggtg
gatcgcttggtggctgattcggatgtggtggtgcatttcgctgcggagtcgcataacgat
aattctttggtggatccgtcgccgtttgttcagaccaatgtggtgggtacgtttacgttg
ttggaggctgcgcgtcgccatgatgtgcgcttccatcatgtgtctacggatgaggttttt
ggtgacttggagttggatgatccgaatcgttttaccgagcacacgccgtataatccgtcg
tcgccgtattcggcaacgaaggccgggtcggatcatctggtacgcgcgtgggttcgttca
tttggattgcgtgcaacgatttctcattgttccaataattatgggccgtaccagcacatt
gagaagtttattccacgccagatcaccaacattttaagtgggctcacgcctaagttgtac
ggtacgggcgagcaggtgcgcgactggatccatgtggatgaccacaatgatgccgtgatc
cggattctagaaagcggtcgcatcggccagacctatatcatcggtgcagacaatgatcat
gtgaacaacaaaaccgttatcacactgatctgtgagctcatgggtgcggacggttttgaa
cacgttgcagaccgccctggccacgatatgcgctacgccatggattcttccaccttgcgt
gcagagctcggctggcagccacgttttaccgataccgataccggcatgcgtgagggctta
ctgcagactatcgagtggtatcgcacgcaccgcgactggtgggagccccaaaaggccgcg
gtagagcagcgttatctagcccaagggcattaa
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