Corynebacterium diphtheriae VA01: CDVA01_1454
Help
Entry
CDVA01_1454 CDS
T01702
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cdv
Corynebacterium diphtheriae VA01
Pathway
cdv03030
DNA replication
cdv03430
Mismatch repair
cdv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDVA01_1454 (dnaE)
03430 Mismatch repair
CDVA01_1454 (dnaE)
03440 Homologous recombination
CDVA01_1454 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdv03032
]
CDVA01_1454 (dnaE)
03400 DNA repair and recombination proteins [BR:
cdv03400
]
CDVA01_1454 (dnaE)
Enzymes [BR:
cdv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDVA01_1454 (dnaE)
DNA replication proteins [BR:
cdv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDVA01_1454 (dnaE)
DNA repair and recombination proteins [BR:
cdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDVA01_1454 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEX83721
LinkDB
All DBs
Position
complement(1559027..1562587)
Genome browser
AA seq
1186 aa
AA seq
DB search
MAKKSSFVHLHNHTEYSMLDGMAKVDMLAEEVVRQGMPAVGMTDHGNMFGSDAFYRAMKA
AGVKPIIGIEAYMAPGSRLHKERVRWGEPHQKSDDVSASGAYLHQTMLAENVEGLHNLFY
LSSMASYEGQLGKWPRMDAELIAEHATGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQ
DIYGKENYFLELMDHGLEIENRVRSELLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLC
VQTGKTLSDPDRFKFDGSGYYIKTAEQMRETWDSLVPQACDNTLWIAERVQDYGEIWEPH
PHDRMPIADVPEGHTPTSWLRHEVHEGLRMRFNGGAVPQNYLERAEFEIDVIDMKGYPSY
FLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMIRYAAQRWGEDKIAQVITFGTVKTKQALKDSARVQYGQEGYKMADR
ITKELPPAIMAKDIPLSGIMDPEHPRYGEAGEVRHLIETDPDVRKIYDTARGLEGVVRQA
GVHACAVIMASVPLLEHIPMWKRANDGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDC
LENIKINRNEELDLEALQTDDPNVYKLLSSGDTLGVFQLDSGGMQELLKRMQPTGFNDIV
ASLALYRPGPMGVNAHWDYADRKNGRKPIEPIHPELEEPLKEILEETYGLIVYQEQIMEI
SRKLANYTAGEADGFRKAMGKKKPEVLAKEYKKFSEGMFSNGYSKAAVDALWGTIEPFAS
YAFNKSHAAGYGLVSYWTAYLKANYTAEYMAALLTSVADKKDKSAIYLSNCRHLDISVLS
PDVNESHLNFMPVGEDIRFGLGAVRNVGEDVVAAIIKAREEKGAFTDFSDYLDKIDITAC
NKRVTESLIKAGAFDSMDHPRKGLLLIHEDAVDAVTSTKKAADKGQFDLFAGLGADAEEV
NNVFAVQIPDAQWDKKHQLALEREMLGLYVSGHPLDGYEEALEAQTDTPLTTILSGELRN
GAEVTIGGIISGVDRRYSKKDGSPWAIVTMEDHHGAQVDLLVFNKIYAIVGPQIVEDNII
LAKAHVSIRDDRMSLFCDDLKVPELGPGNGAGLPLRLTLRTDQCTMENIAKLKQVLSNNK
GDSDVYLNVVHGEEKTVMILGEHLRVNRSGNLMGDLKATMGPGILG
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaatcttcctttgttcacttacataatcacaccgagtattcgatgctcgac
ggaatggcaaaagtggacatgttggcagaagaagttgtcaggcagggcatgcctgcagta
ggtatgaccgatcatggaaacatgtttggatccgatgcattttatcgggcaatgaaagct
gccggggtaaaaccgatcatcggtatcgaagcctatatggcacctggatcacgcttgcac
aaggaacgtgtgcgctggggtgaaccccatcaaaaatccgacgacgtctcagcatctggt
gcctatctccaccaaaccatgctggccgaaaacgttgaagggcttcacaatcttttctac
ttgtcttcgatggcatcgtatgaaggccaattaggtaaatggcctcgaatggatgccgag
ctgatcgcagagcacgccactggaatcattgcgacgacaggatgcccatcaggtgatgtg
caaacgcgtcttcgcctcgggcaatttgaccaagctttggaagccgcagccatgtggcaa
gacatctacggcaaagaaaactacttccttgaactcatggatcacggcctcgagattgag
aatagagtccgctcagagctcctagaaattggccgaaagctcgacttgcccccgttggtg
accaacgactgtcactatgtgctggaatcgcaggctcctgcgcacgaagctatgctgtgc
gtgcaaacaggtaaaaccttgagcgaccccgatcgattcaagttcgacggatcgggctac
tacatcaaaaccgctgagcaaatgcgggaaacgtgggattcactggttccacaagcctgc
gataacacgctatggattgcagagcgtgttcaagactacggcgagatctgggaaccgcat
cctcacgaccgcatgcctattgccgatgttcctgaaggccacaccccaacatcgtggttg
cgacatgaagtccacgaaggattgcgtatgcggttcaacgggggagcagtaccgcagaac
tatctcgagcgcgctgaatttgaaatcgacgttatcgatatgaagggctatccttcctac
ttccttatcgtggctgagctcatcaaacatgcacgttccattggcattagagtggggcct
ggtcgtggttccgcggctggtgcattagttgcttacgcattgaccatcaccaacatcgat
ccaatggagcatggccttctttttgagaggttcttgaacccagagcgtccctctgcacca
gatatcgatattgacttcgacgatcgccgacgcggtgagatgatccgatacgcggctcaa
cgatggggcgaagacaaaattgcccaggtgattacgttcggtaccgtgaaaaccaaacag
gcgttgaaggactcagcgcgcgtgcaatatggtcaagaaggctacaaaatggccgaccgt
attactaaggaacttccgccagcaatcatggcgaaggatattccattatccggaatcatg
gatccagaacaccctcgatacggcgaggcaggtgaggtgcgtcatctgattgaaactgat
ccagatgtgcgcaagatctacgacaccgctcgtggccttgaaggtgttgtgcgacaagct
ggtgtgcacgcttgtgctgtgattatggccagcgttccgctacttgagcatattcctatg
tggaagcgtgctaacgacggtgccttgatcaccggatggccgtatcctgcatgcgaagcc
atcggtttgctgaagatggacttccttggtctgcgtaacctgaccgtgatcggtgactgc
ctagaaaacatcaagatcaatcgaaatgaagagcttgatcttgaagccctacaaaccgac
gatcccaatgtgtacaagctgctatctagtggcgataccctaggcgtgttccagcttgac
tccggcggcatgcaggaattgctgaagcgtatgcaaccaactggcttcaacgatatcgtg
gcgtctctcgcactgtatcgtccaggtccgatgggcgtgaacgcgcactgggactatgca
gatcgcaaaaatggccgaaagcctattgagccaatccaccccgaactcgaagaaccactc
aaggaaatccttgaagaaacctatggtctgatcgtgtatcaagagcagatcatggagatt
tctcgcaagctagcaaactacactgctggcgaagcagatggattccgtaaagccatgggt
aagaagaaacctgaagttcttgccaaggagtataagaagttctctgagggtatgttctcc
aatggttattccaaagcagctgtcgacgcactgtggggaacaattgagccgttcgcatcc
tacgcgtttaacaagtctcacgcggcaggctatgggttggtgtcttattggaccgcctac
cttaaggctaactacaccgcggaatatatggcggcgttgttgacgtcggtggcagataag
aaggacaagtctgcgatctatctttccaactgcaggcatcttgatatttcggtgttgtcg
ccagacgtgaatgaatcccacctaaacttcatgccagttggcgaggacatccgcttcggt
cttggcgcagtgcgtaacgtgggtgaagacgttgtggctgcgatcatcaaggcgcgtgaa
gaaaaaggtgctttcaccgatttttcggattacttagacaagatcgatatcactgcgtgc
aacaagcgtgtgaccgaatccttaattaaggcaggcgcctttgactctatggatcatcct
cgcaaaggattgctgctgatccatgaggatgcagtggatgctgtcaccagtacaaagaaa
gccgccgataaaggccagtttgatctttttgcaggtcttggcgcagacgccgaagaagtc
aataatgtcttcgccgttcaaatcccagatgcacagtgggacaaaaagcatcaacttgcg
ctcgagcgtgaaatgcttggtctttatgtctctggccatccgctcgatggctatgaagaa
gcactagaggcgcaaactgataccccattgaccaccattttgagtggtgagctgcgtaat
ggtgcagaagttaccattggcggaatcatttccggcgtggatcgtcgctactccaagaaa
gacggatctccgtgggcaatcgttaccatggaagaccaccatggtgcacaggtggatctg
cttgtgttcaacaagatctacgccattgtcggtccgcagatcgtggaagataacattatt
cttgctaaggcacatgtcagcattcgtgacgatcgaatgtcgctattctgtgacgacctc
aaagttccagaattgggaccaggcaatggtgctggtctaccgctgcgtcttaccctccga
accgatcagtgcactatggaaaatattgccaagctcaaacaggtgctctctaataacaaa
ggagattccgacgtgtacctgaatgtggttcatggagaagaaaaaacagtgatgattttg
ggcgaacacctccgagttaatcgcagtggaaatctcatgggtgacctgaaagccaccatg
gggccgggcattttggggtag
DBGET
integrated database retrieval system
