Corynebacterium deserti: CDES_02630
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Entry
CDES_02630 CDS
T04068
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cdx
Corynebacterium deserti
Pathway
cdx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDES_02630 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdx03021
]
CDES_02630 (rpoC)
03400 DNA repair and recombination proteins [BR:
cdx03400
]
CDES_02630 (rpoC)
Enzymes [BR:
cdx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDES_02630 (rpoC)
Transcription machinery [BR:
cdx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDES_02630 (rpoC)
DNA repair and recombination proteins [BR:
cdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDES_02630 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ALC04981
UniProt:
A0A0M5ITQ6
LinkDB
All DBs
Position
538255..542256
Genome browser
AA seq
1333 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLDLIIYFGANIITSVDEEARHSDQTTLEAEMLLEKKDVEADAESEIAERAEKLEED
LAELEAAGAKADARRKVQAAADKEMQHIRERAQREIDRLDEVWQTFIKLAPKQMIRDEKL
YDELIDRYEDYFTGGMGAESIEALIRNFDLDAEAEELRDIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLNAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLRLHECGLPKLMALELFKPFVMKRLVENEYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTLEKSPEEFGGQ
GAYQPANENGPEQGVYSSLAEAIMAYDRGVLGLQAPVRIRLDHLRPPADVEAAQFPGGWT
QGESWLAHTTLGRVLFNEILPWNYPYLEGVMVRKGGGSDKIMLGDVVNDLAAKYPMITVA
QTMDKMKDAGFYWATRSGVTIAMSDVLVLPNKEEMLDRYEESARQIEVKYNRGKLTSRER
YDRLVELWKDATDAVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGD
YITRPIKTSFREGLTVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRVED
CGTRQGVRVPVAAEVLDATGAVTGYTRHDLIETSVSGRVLAGDATNAAGEVILAAGTDLT
ELNIDLLVGAGIKEVKVRSVLTCQTPTGVCAKCYGKSMASGHQVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNCAPIASVDGTIHLEDEGNFYTLT
IVPDDGSDNVVYEKLSKRQGLASTRVAMESNAGAFIERTLTEGDHVTVGQRLLRGAADPH
DVLEVLGRRGVEQHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGS
LVDLSEAKLANSEAIGAGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGIARYRNISIKPTEAARNAAYSIPTYGESIYGDDGFG
EFTGASVPLDEAF
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtaaacgtcttcgatgagctccgcatcggcctggccactgctgacgacatc
cgtcgttggtccaagggcgaggtcaagaagccggagaccatcaactaccgaaccctcaag
cctgagaaggacggtctgttctgcgagcgtatcttcggtccaactcgcgactgggagtgc
gcctgcggcaagtacaagcgtgtccgttacaagggcatcatctgtgagcgctgtggcgtt
gaggtcaccaagtccaaggtgcgccgtgagcgcatgggacacattgagctcgccgctcca
gtaacccacatctggtacttcaagggtgttccttcacgccttggctacctgttggacctt
gctccaaaggacctggacctcattatctacttcggtgcaaacatcatcaccagcgtggat
gaagaggctcgccacagcgaccagaccactcttgaggcagaaatgctcctggagaagaag
gacgttgaggcagacgcagagtctgagatcgcagagcgcgctgaaaagctcgaagaggat
ctcgctgagctcgaggcagctggcgctaaggccgatgctcgccgcaaggttcaggctgca
gccgataaggaaatgcagcacatccgtgagcgtgcacagcgcgaaatcgatcgcctggat
gaggtctggcagaccttcatcaagcttgctccaaagcagatgatccgtgacgagaagctc
tacgacgagctgatcgaccgctacgaggattacttcaccggcggcatgggtgcagagtcc
atcgaggctttgatccgcaacttcgacctcgacgctgaggctgaagagctgcgcgacatc
atcaacaacggcaagggccagaagaagatgcgcgccctgaagcgcctgaaggttgtcgca
gccttccagcgctccggtaacgatccagcaggcatggttctgaacgcgatcccagtgatc
ccaccagagcttcgcccaatggttcagcttgacggtggccgcttcgctacctctgacctg
aacgacctttaccgtcgtgtgatcaaccgcaacaaccgcctgaagcgcatgattgaactc
ggtgcacctgagatcatcgtgaacaacgaaaagcgcatgctgcaggaatccgttgacgcg
ctgttcgacaacggtcgtcgtggtcgcccagtgaccggtccaggtaaccgtccactgaag
tctctgtctgaccttctgaagggtaagcagggtcgtttccgccagaaccttctgggtaag
cgtgttgactactctggtcgttccgtaattatcgttggtcctcagctgcgcctccacgaa
tgtggtctgcctaagctgatggctctcgagctcttcaagcctttcgtcatgaagcgcctt
gtggagaacgagtacgcacagaacatcaagtctgcaaagcgcatggttgagcgtcagcgc
cctgaggtgtgggacgttcttgaagaggccatctctgagcacccagtgatgctgaaccgt
gcaccaaccctgcaccgcctcggcatccaggcgttcgagcctgtcctcgtcgagggtaag
gctattcagctgcacccactggcctgtgaagcattcaacgctgacttcgacggtgaccag
atggcagttcacctgccactgtccgctgaggctcaggctgaagctcgcatcctgatgctt
gcatccaacaacattctgtctcctgcgtctggtaagccactggctatgccacgtctggat
atggttaccggtctgtactacctgactctggagaagtctcctgaggagttcggtggacag
ggtgcttaccagccagcaaatgagaacggccctgagcagggtgtgtactcctccttggct
gaggcaatcatggcgtacgaccgcggcgtgcttggtctccaggcacccgtgcgtatccgc
cttgatcacctgcgcccaccagcagacgttgaagcagcacagttcccaggtggctggact
cagggtgaatcctggctcgcacacaccaccttgggtcgtgtcctgttcaacgagatcctg
ccttggaactacccataccttgagggcgtcatggtccgtaagggtggcggctccgacaag
atcatgcttggcgacgtggtcaacgacctcgctgctaagtacccaatgatcactgtggct
cagaccatggacaagatgaaggacgctggtttctactgggctacccgctccggtgtcacc
atcgctatgtctgacgttctggttcttccaaacaaggaagaaatgctggaccgctacgag
gaatctgcacgacagatcgaagttaagtacaaccgcggtaagctcaccagccgtgagcgt
tacgaccgactggtcgagctgtggaaggacgcaaccgacgctgttggtcaggctgttgag
gatctgtacccagatgacaacccaattccaatgatcgtgaagtccggtgctgccggtaac
atgcgtcagatttggacccttgcaggtatgaagggcatggttgtgaactcgaagggtgac
tacatcacccgtcctatcaagacttccttccgtgaaggcctgacagttctcgagtacttc
aacaactcccacggttcccgtaagggtctggccgataccgcactgcgtactgctgactct
ggctacctgacccgtcgtcttgttgacgtcgctcaggacgtcatcgtccgcgtcgaagac
tgtggcacccgccagggcgttcgcgttcctgttgctgctgaagttttggatgcaaccggt
gcagtcaccggctacacccgccatgacctgatcgagacttctgtttctggtcgtgttttg
gctggcgacgcaaccaacgctgctggtgaggttatcctcgctgctggcaccgacctgacc
gagctcaacattgatctcttggttggggctggcatcaaggaagttaaggttcgttccgta
cttacctgccagaccccaaccggtgtgtgtgcaaagtgctacggcaagtccatggcttcc
ggccaccaggttgatatcggagaggctgtcggcatcgtggctgcacagtccatcggtgag
cctggtacccagctgaccatgcgtaccttccaccagggtggtgtcggtggcgacatcacc
ggcggtctgcctcgtgttcaggagctgtttgaggcgcgtgttcctaagaactgtgcacca
atcgcttccgtcgacggcaccatccaccttgaggatgagggcaacttctacaccttgacc
atcgtccctgacgatggctcggacaacgttgtctacgagaagctgtccaagcgacagggt
ctcgcatccactcgcgtggcaatggaatcgaacgcaggtgccttcatcgagcgcactctg
accgagggtgaccacgtcaccgttggccagcgtctgctccgcggtgctgccgatcctcac
gatgttctcgaagttttgggtcgtcgtggtgtggaacagcacctcatcgatgaggtccag
gctgtttaccgtgcacagggtgtggccatccacgacaagcacatcgaaattatcattcga
cagatgcttcgtcgcggtaccgtcatcgaatccggttctaccgagttcctcccaggttct
ttggtggatctgtctgaggcaaagctcgctaactccgaggcaatcggtgctggcggacag
cctgcagagctccgctctgagatcatgggtatcaccaaggcatcgctggcaactgagtcg
tggctgtccgctgcatccttccaggagaccactcgtgtcctgactgatgctgcgatcaac
aagcgctccgacaaactcattggtctgaaggagaacgtgatcatcggtaagctgatccca
gctggtaccggtatcgcgcgctaccgcaacatctccatcaagccaaccgaggctgcacgc
aacgccgcatactcgattcctacctacggtgagtcgatctacggtgatgacggattcggt
gagttcaccggcgcatccgtcccattggatgaggctttctag
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