Clostridium diolis: F3K33_04380
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Entry
F3K33_04380 CDS
T06237
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cdy
Clostridium diolis
Pathway
cdy03030
DNA replication
cdy03410
Base excision repair
cdy03420
Nucleotide excision repair
cdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F3K33_04380 (polA)
03410 Base excision repair
F3K33_04380 (polA)
03420 Nucleotide excision repair
F3K33_04380 (polA)
03440 Homologous recombination
F3K33_04380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdy03032
]
F3K33_04380 (polA)
03400 DNA repair and recombination proteins [BR:
cdy03400
]
F3K33_04380 (polA)
Enzymes [BR:
cdy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F3K33_04380 (polA)
DNA replication proteins [BR:
cdy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F3K33_04380 (polA)
DNA repair and recombination proteins [BR:
cdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F3K33_04380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F3K33_04380 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
Longin
Motif
Other DBs
NCBI-ProteinID:
QES72080
UniProt:
A0A5P2ETR7
LinkDB
All DBs
Position
945733..948336
Genome browser
AA seq
867 aa
AA seq
DB search
MKKLLVLDSNSLMNRAFYALPPLTNSDGINTNAIYGFINMLLKMKDEINPDSIIATFDLK
APTFRHKEYSEYKAGRNKMPPELAEQFPIIKELFKLMGIKIFEVEGFEADDLIGTVSKFA
EDNNTEVFVVTGDRDALQLASEKTKIIITKKGVSETAVYDKESFMDEFEVTPEQFIDVKG
LMGDKSDNIPGVPGVGEKTAFKLIKEYGSVEEVIKNIDKISGKKLKENLENNVEQAIFSK
KLATIMREVPIELNLEDISSSNKENILEIKKMLIKLEMKSILSKFNDDTVQEESNIEVRN
ITTIEDMKALFSEMRNRIYIDYTLTDASKYSKLKLEYLMFGEENKGTIIDFKDISSKDSE
EALKVLKNLMEDDNVKKVIHDGKNFVTFLNKNQIEIKGFDFDTAIAAYLIDSSKSKYEIL
ELVNHYIGDNPNSEDSNIKAILCSYLPMIYEKLKENLHKENMDQLYYEVEHPLIYVLSSM
ESIGFNINQGMLDELQTKFKKEIDKTQKEIYELADEEFNISSPKQLGKILFEKLDLPVIK
KTKTGYSTNQEVLEKLMNKHDIIPKIMYYRQITKINSTYVEGLKNVVDEDGRIHSNFNQT
VTTTGRLSSTEPNLQNIPIKYEMGREIRKVFIPMEETDILFSCDYSQIELRVLAHIAGDE
NMIDAFEHHSDIHTKTASEVFKVPIGEVTSLMRSRAKAVNFGIVYGISAFSLAEDLKITK
KEAEEYMSIYLERYPKIKEYLENVVDEAKENGYVLTILNRRRFIPEIKSSNKIVKALGDR
LAMNAPIQGSAADIIKLAMVNVYNRLNEKELKSELILQVHDELILNVKKDEFEEVKNLVA
YEMENAIKLKVALDVDVNFGDTWYDAK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattattggttttagactcaaattcacttatgaatagggctttttatgctttg
cctcctcttacaaatagtgatggaataaatactaatgccatttatggttttataaatatg
ctacttaaaatgaaggatgaaattaatccagatagtataattgctacttttgatttgaaa
gcaccaacttttagacataaagagtattctgaatataaagcaggtaggaataagatgccg
ccagaacttgcggaacaattcccgattattaaagaactatttaagttaatgggaattaag
atatttgaagttgaaggctttgaggcagatgatttgattggaacagtatcaaaatttgct
gaggacaataatacagaagtatttgtagttacaggagatcgtgatgcacttcaactagca
tcagaaaaaactaaaattataattactaagaaaggtgtcagtgaaactgctgtttatgat
aaagaaagctttatggatgagtttgaagtgactccagagcaatttatagatgtaaaagga
ttaatgggagataagtcagataatataccaggcgttccaggagtgggagaaaagactgct
tttaagcttataaaggaatatggatctgttgaagaagttattaaaaatatagataaaatt
tccgggaaaaaacttaaggaaaatttagaaaataatgttgaacaagcaatattttctaag
aaattagctacaattatgagagaagttccaatcgaattaaatttagaagatataagttct
agtaataaagaaaatatattagaaattaagaagatgctcattaaacttgagatgaagtca
atattatctaaatttaatgatgatacagttcaggaagaatctaacattgaagtgagaaat
attactacaattgaagatatgaaagcattattctcagagatgagaaatagaatttatata
gattatactttaactgatgcatctaaatattctaaattaaaacttgaatatttaatgttc
ggggaagaaaataagggtactattatagattttaaagacataagttctaaggatagtgaa
gaagctttaaaagttttgaaaaatcttatggaagatgataatgttaaaaaagttattcat
gatggaaaaaactttgttacatttttaaataaaaatcaaattgaaataaagggatttgat
tttgatactgcgatagcagcttatttaattgattcatcaaagagtaaatatgaaattcta
gaacttgttaatcattatattggtgataatcctaacagtgaagacagcaatattaaggca
attctttgcagttacttacctatgatttatgagaaattaaaagaaaatcttcataaggaa
aatatggatcaactttattatgaagtggagcatccattaatttatgtgctttcatccatg
gagagtattggatttaacataaatcaaggtatgttagatgagctacagactaagtttaaa
aaagaaatcgataagacacaaaaagaaatatatgaattagcggatgaggaatttaatatt
agttctcctaagcaactaggaaaaatattatttgaaaaattggatttaccagtcattaag
aaaacaaaaactggatattcaactaaccaagaagttttagagaagctaatgaataagcat
gatataatacctaaaataatgtattataggcaaatcacaaagataaattctacatatgta
gaaggtttaaaaaatgtggttgatgaagatgggcgtatccattcaaacttcaatcaaact
gtaactacaacaggaagactatcaagcacagaacctaatttgcaaaatattcctataaaa
tatgaaatgggtagagaaataagaaaagtatttataccaatggaagaaactgatatactg
ttttcatgtgactattcgcaaatagaattaagggtattggctcatattgctggagatgaa
aatatgatagatgcatttgagcatcatagtgatattcacacaaaaactgcttcggaagta
tttaaagttccgataggagaggttacttctcttatgagaagtagagcaaaagcagttaat
tttgggatagtgtatgggataagtgcgtttagtcttgcagaagatttaaagatcacaaag
aaagaagcagaagaatacatgtctatatatttagaaagatatcctaagataaaagaatat
cttgaaaatgttgtagatgaagctaaagaaaatggatatgtattgacaattttaaataga
agaagatttattcctgagataaaatcttccaataagatagttaaggctttgggtgataga
ttggcaatgaatgcaccaattcaaggaagtgcagctgatataataaagcttgcaatggta
aatgtttataacagattaaatgaaaaagaattaaaaagtgaattaatccttcaagtacac
gatgaacttattttaaatgtaaaaaaagatgaatttgaagaagttaaaaatttagttgct
tatgaaatggaaaatgcaattaagttaaaagtagcacttgatgtggatgttaattttgga
gatacatggtacgatgccaaataa
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