Dickeya fangzhongdai ND14b: LH89_01275
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Entry
LH89_01275 CDS
T03347
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH89_01275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_01275
Transporters [BR:
ced02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LH89_01275
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_16
AAA
nSTAND1
AAA_22
AAA_25
AAA_33
AAA_29
NACHT
RsgA_GTPase
IstB_IS21
AAA_23
NB-ARC
AAA_28
ATPase_2
nSTAND3
AAA_30
AAA_5
TsaE
Mg_chelatase
Rad17
PduV-EutP
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AIR67903
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Position
304211..305293
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AA seq
360 aa
AA seq
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MSRLEVERASVAYGDVPVLKGVSFDVNEGEFVTLLGPSGCGKTTLLRAIAGFVPLDGGHI
RIGGREMNGLEPEKRNTAMCFQSYALFPHLTVSENIAFGLQQRKVAREALSHRVVETALT
VAMAGHLDKLPTQLSGGQQQRVALARSMAVRPDVMLFDEPLSNLDARLREQLRLQIRALQ
RKHGFTAVYVTHDQAEALAMSDKVIVMHGGSVIQSGTPQEIYHRPVNRFVADFIGTANIM
VGTVTARDGDAGLYRVTTALGEFTVASDEPPAQQRVYLCWRPENACLLSLPALGQNIFSL
RVKRQTFLGNLTDVEGCHQDTDSVQYRIQLLGYQPLLEGETYYFSLAPGALRFLREAVAA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagtagactggaagtggaacgcgccagcgtggcctacggtgatgttcctgtcctcaaa
ggggtgtcgtttgacgttaacgagggtgagttcgtcactctgctggggccgtccggatgc
ggcaaaaccacgctgctgcgcgccattgccggctttgttccgctggacggcgggcatatc
cgcattggcggccgggaaatgaatggcctggaaccggaaaaacgcaatacggcgatgtgt
tttcagtcttatgcgctgtttccccacctgacggtatcggaaaacatcgcctttgggtta
cagcagcgcaaagtggcgcgggaagcgttgagccaccgggtagtcgaaaccgcgctgacc
gtggcgatggccgggcatctggataaattacccacccagttatcgggcggtcagcagcag
cgggtggcgctggcgcgttcaatggcggtgcgcccggatgtgatgctgttcgacgaaccg
ctgtccaatctggatgcccggctgcgcgagcaactgcggttgcagatccgcgccttgcag
cgtaagcacggttttaccgcggtttatgtgactcacgaccaggcggaggcgctggcgatg
tccgacaaggtgatagtgatgcacggcggcagcgtgattcagtctggaaccccgcaggag
atttatcatcggccggtcaaccgctttgtggccgattttatcggcaccgccaacattatg
gtggggacggtcaccgcgcgggacggggacgccgggctgtatcgggtcaccaccgcgctg
ggcgaattcacggtggcgtcggacgagccgccggctcagcagcgagtctatctctgctgg
cggccggaaaacgcctgcctgctgtcgctgcccgcgctggggcagaatatcttttcgctg
cgggttaaacgccagacctttctcggcaatctgacggatgtcgaaggttgtcatcaggat
accgacagcgtccagtaccgtatccaattgttgggttatcagccgctgctggagggcgaa
acctattatttttcgctggcgcccggcgcgttgcggtttttgcgcgaggcggtggcggca
tga
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