KEGG   Dickeya fangzhongdai ND14b: LH89_01275
Entry
LH89_01275        CDS       T03347                                 
Name
(GenBank) ABC transporter ATP-binding protein
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
ced  Dickeya fangzhongdai ND14b
Pathway
ced02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ced00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LH89_01275
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ced02000]
    LH89_01275
Transporters [BR:ced02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    LH89_01275
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_16 AAA nSTAND1 AAA_22 AAA_25 AAA_33 AAA_29 NACHT RsgA_GTPase IstB_IS21 AAA_23 NB-ARC AAA_28 ATPase_2 nSTAND3 AAA_30 AAA_5 TsaE Mg_chelatase Rad17 PduV-EutP AAA_18
Other DBs
NCBI-ProteinID: AIR67903
LinkDB
Position
304211..305293
AA seq 360 aa
MSRLEVERASVAYGDVPVLKGVSFDVNEGEFVTLLGPSGCGKTTLLRAIAGFVPLDGGHI
RIGGREMNGLEPEKRNTAMCFQSYALFPHLTVSENIAFGLQQRKVAREALSHRVVETALT
VAMAGHLDKLPTQLSGGQQQRVALARSMAVRPDVMLFDEPLSNLDARLREQLRLQIRALQ
RKHGFTAVYVTHDQAEALAMSDKVIVMHGGSVIQSGTPQEIYHRPVNRFVADFIGTANIM
VGTVTARDGDAGLYRVTTALGEFTVASDEPPAQQRVYLCWRPENACLLSLPALGQNIFSL
RVKRQTFLGNLTDVEGCHQDTDSVQYRIQLLGYQPLLEGETYYFSLAPGALRFLREAVAA
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgagtagactggaagtggaacgcgccagcgtggcctacggtgatgttcctgtcctcaaa
ggggtgtcgtttgacgttaacgagggtgagttcgtcactctgctggggccgtccggatgc
ggcaaaaccacgctgctgcgcgccattgccggctttgttccgctggacggcgggcatatc
cgcattggcggccgggaaatgaatggcctggaaccggaaaaacgcaatacggcgatgtgt
tttcagtcttatgcgctgtttccccacctgacggtatcggaaaacatcgcctttgggtta
cagcagcgcaaagtggcgcgggaagcgttgagccaccgggtagtcgaaaccgcgctgacc
gtggcgatggccgggcatctggataaattacccacccagttatcgggcggtcagcagcag
cgggtggcgctggcgcgttcaatggcggtgcgcccggatgtgatgctgttcgacgaaccg
ctgtccaatctggatgcccggctgcgcgagcaactgcggttgcagatccgcgccttgcag
cgtaagcacggttttaccgcggtttatgtgactcacgaccaggcggaggcgctggcgatg
tccgacaaggtgatagtgatgcacggcggcagcgtgattcagtctggaaccccgcaggag
atttatcatcggccggtcaaccgctttgtggccgattttatcggcaccgccaacattatg
gtggggacggtcaccgcgcgggacggggacgccgggctgtatcgggtcaccaccgcgctg
ggcgaattcacggtggcgtcggacgagccgccggctcagcagcgagtctatctctgctgg
cggccggaaaacgcctgcctgctgtcgctgcccgcgctggggcagaatatcttttcgctg
cgggttaaacgccagacctttctcggcaatctgacggatgtcgaaggttgtcatcaggat
accgacagcgtccagtaccgtatccaattgttgggttatcagccgctgctggagggcgaa
acctattatttttcgctggcgcccggcgcgttgcggtttttgcgcgaggcggtggcggca
tga

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