KEGG   Dickeya fangzhongdai ND14b: LH89_02920
Entry
LH89_02920        CDS       T03347                                 
Symbol
rumB
Name
(GenBank) 23S rRNA methyltransferase
  KO
K03212  23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
Organism
ced  Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:ced00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ced03009]
    LH89_02920 (rumB)
Enzymes [BR:ced01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     LH89_02920 (rumB)
Ribosome biogenesis [BR:ced03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LH89_02920 (rumB)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 MTS Methyltransf_15 Methyltransf_12 Cons_hypoth95 Methyltransf_11
Other DBs
NCBI-ProteinID: AIR68212
LinkDB
Position
complement(673949..675079)
AA seq 376 aa
MQCARYNDGSCRSCQWLEIAYPQQVSDKQQHLIGLLSAHPVQQWLSPVTSAEVAFRNKAK
MVVSGSVERPLLGMLHRDGSAVDLCDCPLYPDSFAPVFAILKAFIARAGLTPYNVARRRG
ELKYLLLTQSTLSGRFMLRFVLRSETKLAQLRAALPWLQQQLPQLAVISANIQPVHQAIL
EGEQEIPLTEAQALEERFNQVPLYIRPQSFFQTNPQVAAALYDTARQWVSTLPVRSLWDL
FCGVGGFGLHCASPGTPLTGIEISPEAIACARRSAAQLGLTDVSFAALDSTRFAVGETQT
PDLVIVNPPRRGIGAELCDYLSRMAPPYLLYSSCNAESMARDIARLPAYQIQQAQLFDMF
PHTAHYEVLALLQRRV
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgcaatgtgcccgctataacgacggttcgtgccgttcctgccaatggctggaaatcgcc
tatccgcagcaggtgagcgataagcagcagcacctgatcggattgctgtccgcccatccg
gttcaacaatggttgtcgccggtaacctcggcggaagtcgcctttcgcaataaagccaag
atggtggtcagcggcagtgtggaacgcccgttgttggggatgctgcaccgtgacggttcg
gcggtggatctctgcgactgcccgctgtatcccgacagctttgcgccggtgttcgccata
ctgaaagcattcatcgcccgtgccggtttaaccccctataacgtcgcccggcgccggggg
gaactgaaatacctgttgttgacgcaaagcaccctgagcggtcgcttcatgctgcgcttt
gtgctgcgatccgaaaccaagctggcgcaattgcgcgccgcgttgccctggctgcagcag
cagttgccgcaactggcggtaatatcggcgaatattcagccggttcatcaggcgatactg
gaaggggagcaagagattccgctgacggaagcgcaggcgctggaagagcgctttaatcag
gtaccgctgtatatccggccgcaaagtttcttccagaccaacccgcaggtggcggcggcg
ctgtatgacaccgcccggcagtgggtgtcaacgttgccggtgcgcagcctgtgggatctg
ttttgtggcgtaggcggattcggcctgcattgcgccagccctggcacgccgcttaccggc
attgagatcagcccggaagccatcgcctgtgcccggcgttcggcggcgcagctggggctg
acagacgtcagtttcgccgcgcttgattccacccgctttgccgttggcgaaacccagacg
ccggatctggtgatcgtcaacccgccccggcgcggtatcggcgctgaattgtgcgattac
ctgagccgcatggcgccgccgtatctgttgtactccagctgcaatgccgagagcatggcg
agagacattgcgcgcctgccggcgtaccagatacagcaggcgcaactgttcgatatgttc
ccgcacaccgcgcattacgaggtgctggcgctgctgcaacgacgtgtttaa

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