Corynebacterium efficiens: CE1499
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Entry
CE1499 CDS
T00103
Name
(GenBank) putative xcinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cef
Corynebacterium efficiens
Pathway
cef03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CE1499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cef03400
]
CE1499
DNA repair and recombination proteins [BR:
cef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CE1499
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CE1499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_30
Helicase_RecD
HEM4
AIG1
nSTAND3
DUF87
AAA_5
UvrD-helicase
AAA_7
UB2H
Motif
Other DBs
NCBI-ProteinID:
BAC18309
NITE:
CE1499
UniProt:
Q8FTR2
LinkDB
All DBs
Position
1564604..1566709
Genome browser
AA seq
701 aa
AA seq
DB search
MAFAAEQPVLSHSEHRPVGEVERSDDKFEVISEFQPAGDQPAAIAELDKRLTNGERDVVL
LGATGTGKSATAAWLIEKQQRPTLVMAPNKTLAAQLANELRQLLPNNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINEDVERLRHSATSSLLSRRDVVVVSSVSCIYGLGTPQSYLDR
SIVLKVGDEVDRDRFLRLLVDIQYDRNDIAFTRGAFRVKGDTVDIIPAYEELAVRVEFFG
DEIDSLYYIHPLTGDVVRNVKEVHIFPATHYVAGPERMEKAVADIKAELEDRLADLENRG
KLLEAQRLRMRTEYDLEMIEQVGFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLTIID
ESHVTVPQIGGMFEGDMSRKRNLVEFGFRLPSALDNRPLTWEEFDARRGQTVFMSATPGK
FEIAAAGGEFVEQVIRPTGLVDPKVTVKPTKGQIDDLIHEIRGRTEKDERVLVTTLTKKM
AEDLTDYLLENGIRVRYLHSDIDTLQRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSTTSLIQTIGRAARNVSGEVIMYADKITDSMQYAIEETDRRREKQIAY
NKEYGIDPQPLRKKIADILDQVYENQESGVGAPGLTGDAAVVEKPDTSGMQVDQLQKLID
DLSAQMAAAARELKFELAGRLRDEVFELKKELKGMKEVGMQ
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgctgctgaacaaccagtcctgtcccactccgagcaccgacccgtcggggag
gtcgagcgctccgacgataagttcgaggtcatctccgaattccagccggcgggtgaccag
ccggcggcgatcgcggagttggacaaaaggctgaccaatggtgagcgtgatgtggtgctg
ctgggtgccacgggtacgggtaagtcggcgacggcggcgtggttgatcgagaagcagcag
cgccccaccctggtgatggcaccgaacaagacactcgccgcgcagctggccaatgagttg
cgccagctgctgccgaacaacgcggtggagtatttcgtgtcctactacgactactaccag
ccggaggcgtacatcgcgcagacggatacctacatcgagaaggactcctcgatcaacgag
gatgtggagcgtctgcgacactcggcgacatcctcgctgctgagtcgccgggatgtggtg
gtggtcagttccgtctcgtgtatctacggtctgggcaccccgcagtcctacctggaccgt
tcgatcgtgttgaaggtgggggatgaggtcgaccgtgaccgcttcctgcgcctgttggta
gatatccagtatgaccgcaatgacattgcgttcacccgtggtgcgttccgcgtcaagggg
gacacggtggacatcatcccggcgtatgaggaactggcggtgcgggtggagttcttcggt
gatgagatcgacagtctctactacatccacccgctgaccggagacgtggtccgcaacgtg
aaagaggtgcacatcttccccgccacccactacgttgcgggcccggaacgcatggagaag
gccgtcgcggatatcaaggccgagctggaggaccgtctcgccgacctggagaaccgcggc
aagctgctggaggcccagcgtctgcgcatgcgtaccgaatatgacctggagatgatcgaa
caggtggggttctgctccggtattgagaactactcccgccacatcgacggccgtggcccc
ggcactgcgccggcgaccctgatcgactacttcccggaggatttcctcaccatcatcgac
gagtcgcacgtaactgtgccccagatcggtggcatgttcgagggcgatatgtcgcgtaaa
cgcaacctggtggagttcgggttccgtctgccgtccgccctggataaccgcccgctgacc
tgggaggagttcgacgcgcgacgcggccagaccgtgttcatgtccgccacacccggcaag
ttcgagatcgccgccgccggtggtgagttcgtggagcaggtcatccgtcccaccggtctg
gtggacccgaaggtcacggttaaacccaccaagggccagatcgatgacctcatccacgag
atccggggccgaaccgagaaggacgagcgtgtcctggtgaccaccctgaccaagaagatg
gccgaggacctcaccgactacctcctggagaacggcatccgcgtgcgctacctgcactcc
gatatcgacaccctccagcgcgtggaactgctgcgccagctgcggctgggtgagtacgac
gtgctggtgggcatcaacctgctgcgtgagggcctcgatctgcccgaggtgtccctggtg
gccatcctcgacgcggacaaggagggcttcctgcgctcgaccacctcactgatccagacc
atcggacgcgccgcccgaaacgtctccggcgaggtgatcatgtacgccgacaagatcacc
gactccatgcagtacgccatcgaggagaccgaccgcaggcgcgagaagcagatcgcctat
aacaaggaatacggcatcgacccgcagccgctgcgcaagaagatcgccgacatcctcgac
caggtctacgagaaccaggaatccggtgtcggcgcaccggggctcaccggtgatgccgcc
gtggtggagaaacccgacacctccgggatgcaggtggatcagctgcagaagcttatcgac
gatctctccgcccagatggccgccgccgcccgcgaactcaaattcgagctggccggccga
ctgcgtgatgaggtcttcgagctgaagaaggaacttaaaggcatgaaggaagtgggtatg
cagtag
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integrated database retrieval system
