KEGG   Cellvibrio sp. KY-YJ-3: D0B88_01155
Entry
D0B88_01155       CDS       T06234                                 
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
cek  Cellvibrio sp. KY-YJ-3
Brite
KEGG Orthology (KO) [BR:cek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cek03009]
    D0B88_01155 (rluD)
Enzymes [BR:cek01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     D0B88_01155 (rluD)
Ribosome biogenesis [BR:cek03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    D0B88_01155 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 NepR DUF6170
Other DBs
NCBI-ProteinID: QEY10979
UniProt: A0A5J6NVN9
LinkDB
Position
complement(247324..248289)
AA seq 321 aa
MKDVFDLSAQVPIQMSGMRFDQIASELFPDFSRSRLQSWIKDGQLKVDGRIAKPKDKLIG
GEQLELKAELEAQGEWEPEEITLDIVHEDDDLIIINKQAGLVVHPAAGNYTGTLVNALLN
HIPGLINLPRAGIVHRLDKETTGLMVIAKTLEAHTDLVEQLSDRTVSREYEAVAVGAMTG
GGTVDAPMGRHPIQRKLMAVLSAGGKRAVTHYRVAKRYPHHTHIRVKLETGRTHQIRVHM
AHIGHPLVGDQTYGNRFKIPKGANQHLIDTLKGFPRQALHAFKLGLEHPGTGEYTEWTAP
IPEDFRNLLDALNKGYIRDDE
NT seq 966 nt   +upstreamnt  +downstreamnt
atgaaagatgtttttgacctgagcgcacaggtgccgatccagatgagcggcatgcgcttc
gaccagatcgcctccgagttgttccctgacttttcccgctcgcgtttgcagagctggatt
aaagacggccaactcaaggtggatggtcgcatcgccaagccgaaagacaagttgatcggc
ggcgagcagttggaattaaaggcggagcttgaggctcagggcgagtgggagccggaagag
attacgctggatatagttcatgaagatgatgacctgattatcatcaataagcaggcaggc
ttggtggttcacccggcggcgggcaattataccggtacgctggtgaatgcattgctcaac
catattcccgggctaattaacctgccgcgcgcaggcatagtgcatcgtctcgataaagaa
accacgggtttgatggtgattgccaaaaccctggaagcccataccgatctggttgagcag
ttgtccgatcgcactgtgagccgtgaatatgaagcggtggcggtaggtgcgatgaccggc
ggaggtacagtggatgctcccatggggcgtcaccccatccagcgcaagttgatggctgtg
ctcagtgctggcggtaaacgtgcagtcactcattaccgtgtggccaagcgctacccccat
cacacccatatccgcgtaaaactggagaccgggcgcactcatcaaattcgcgttcacatg
gcgcatatcggccacccgctggtgggcgatcaaacctacggcaaccgttttaaaattccc
aaaggcgccaatcagcatttgattgataccctcaaaggtttcccgcgtcaggcactgcat
gcgttcaagttggggttagagcaccccggcaccggcgagtacaccgaatggacggcgcca
attccggaggatttccgcaacctcctcgacgcgttgaacaagggttatattcgcgacgat
gaataa

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