Cellvibrio sp. KY-YJ-3: D0B88_01155
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Entry
D0B88_01155 CDS
T06234
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cek03009
]
D0B88_01155 (rluD)
Enzymes [BR:
cek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
D0B88_01155 (rluD)
Ribosome biogenesis [BR:
cek03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D0B88_01155 (rluD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
NepR
DUF6170
Motif
Other DBs
NCBI-ProteinID:
QEY10979
UniProt:
A0A5J6NVN9
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All DBs
Position
complement(247324..248289)
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AA seq
321 aa
AA seq
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MKDVFDLSAQVPIQMSGMRFDQIASELFPDFSRSRLQSWIKDGQLKVDGRIAKPKDKLIG
GEQLELKAELEAQGEWEPEEITLDIVHEDDDLIIINKQAGLVVHPAAGNYTGTLVNALLN
HIPGLINLPRAGIVHRLDKETTGLMVIAKTLEAHTDLVEQLSDRTVSREYEAVAVGAMTG
GGTVDAPMGRHPIQRKLMAVLSAGGKRAVTHYRVAKRYPHHTHIRVKLETGRTHQIRVHM
AHIGHPLVGDQTYGNRFKIPKGANQHLIDTLKGFPRQALHAFKLGLEHPGTGEYTEWTAP
IPEDFRNLLDALNKGYIRDDE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtttttgacctgagcgcacaggtgccgatccagatgagcggcatgcgcttc
gaccagatcgcctccgagttgttccctgacttttcccgctcgcgtttgcagagctggatt
aaagacggccaactcaaggtggatggtcgcatcgccaagccgaaagacaagttgatcggc
ggcgagcagttggaattaaaggcggagcttgaggctcagggcgagtgggagccggaagag
attacgctggatatagttcatgaagatgatgacctgattatcatcaataagcaggcaggc
ttggtggttcacccggcggcgggcaattataccggtacgctggtgaatgcattgctcaac
catattcccgggctaattaacctgccgcgcgcaggcatagtgcatcgtctcgataaagaa
accacgggtttgatggtgattgccaaaaccctggaagcccataccgatctggttgagcag
ttgtccgatcgcactgtgagccgtgaatatgaagcggtggcggtaggtgcgatgaccggc
ggaggtacagtggatgctcccatggggcgtcaccccatccagcgcaagttgatggctgtg
ctcagtgctggcggtaaacgtgcagtcactcattaccgtgtggccaagcgctacccccat
cacacccatatccgcgtaaaactggagaccgggcgcactcatcaaattcgcgttcacatg
gcgcatatcggccacccgctggtgggcgatcaaacctacggcaaccgttttaaaattccc
aaaggcgccaatcagcatttgattgataccctcaaaggtttcccgcgtcaggcactgcat
gcgttcaagttggggttagagcaccccggcaccggcgagtacaccgaatggacggcgcca
attccggaggatttccgcaacctcctcgacgcgttgaacaagggttatattcgcgacgat
gaataa
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