KEGG   Caenorhabditis elegans (nematode): CELE_C03G5.1Help
Entry
CELE_C03G5.1      CDS       T00019                                 

Gene name
sdha-1
Definition
(RefSeq) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel00020  Citrate cycle (TCA cycle)
cel00190  Oxidative phosphorylation
cel01100  Metabolic pathways
cel01200  Carbon metabolism
Module
cel_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cel_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cel_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    CELE_C03G5.1 (sdha-1)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    CELE_C03G5.1 (sdha-1)
Enzymes [BR:cel01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     CELE_C03G5.1 (sdha-1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Thi4 GIDA Pyr_redox_2 DAO HI0933_like FAD_binding_3
Motif
Other DBs
NCBI-GeneID: 181108
NCBI-ProteinID: NP_509446
WormBase: WBGene00015391
Ensembl: WBGene00015391
UniProt: Q09508
LinkDB All DBs
Position
X:complement(join(8543210..8543446,8543665..8544013,8544168..8544753,8544801..8545063,8545302..8545548,8545592..8545773,8545939..8546015))
Genome map
AA seq 646 aa AA seqDB search
MLRAASNGLRNTVAARSVSLSAANHSDAKRSDIAQYKVVDHAYDAVVVGAGGAGLRAAMG
LAEGGLKTAVITKLFPTRSHTVAAQGGINAALGNMNPDNWRWHFYDTVKGSDWLGDQDAI
HYMTREAERAVIELENYGMPFSRTTDGKIYQRAFGGQSNDFGRGGQAHRTCCVADRTGHS
LLHTLYGASLQYNCNYFVEYFALDLIMENGVCVGVIAMDLEDGTIHRFRSKNTVLATGGY
GRAFFSCTSAHTCTGDGTALTARAGINNSDMEFVQFHPTGIYGAGCLITEGSRGEGGYLV
NSAGERFMERYAPNAKDLASRDVVSRSMTVEIMEGRGVGPDKDHIYLQLHHLPAEQLQQR
LPGISETAMIFAGVDVTKEPIPVIPTVHYNMGGVPTNYKGQVLNYTPKKGDEVVPGLYAA
GECGAHSVHGANRLGANSLLDLVIFGRACAIDILKNTSAGVGVPELPKNAGEASVANIDK
LRHNKGDISTAELRLTMQKSMQNHAAVFRRGDILKEGVKVLSKLYKDQAHLNVADKGLVW
NSDLIETLELQNLLINATQTIVAAENREESRGAHARDDFPDRLDELDYSKPLEGQTKKEL
KDHWRKHSIIRSNIETGEVSLDYRPVIDTTLDKSETDWVPPKVRSY
NT seq 1941 nt NT seq  +upstreamnt  +downstreamnt
atgctccgagccgccagcaacggcctccgtaacacggtcgccgcccgttctgtttcgctt
tccgctgcaaaccacagtgatgccaagcgatccgatattgctcaatacaaggtcgtcgat
catgcttacgacgcagttgttgttggagccggaggagctggtctccgtgccgctatggga
cttgccgaaggaggacttaagaccgctgttatcaccaaactttttccaaccagatctcac
acagtcgcagctcaaggaggaatcaatgctgctctaggaaacatgaacccagataactgg
cgctggcatttctacgacactgtgaaaggatccgattggctcggagatcaggatgccatt
cactacatgactcgtgaagccgagagagctgtcattgagcttgagaattacggaatgcca
ttctctcgtaccaccgatggaaaaatttaccagcgtgctttcggaggacaatccaacgat
tttggacgtggaggacaggctcacagaacttgctgtgttgctgatcgtactggtcattct
cttctccacaccctctacggagcttccctccaatacaactgcaactactttgttgagtac
tttgccctagatctcatcatggagaacggagtctgtgtcggagtcatcgccatggatctt
gaagatggaactattcatcgtttccgctcaaagaacactgttctcgctactggtggatac
ggaagagccttcttctcttgcacatctgctcacacttgcactggagacggaactgctttg
actgctcgtgctggaatcaacaactctgacatggagtttgttcaattccacccaactgga
atctatggagctggatgcttgatcactgagggatctcgtggagaaggaggatatttggtg
aactccgctggagaacggttcatggaacgttatgcaccaaacgccaaggatctcgcctcc
cgtgacgtcgtgtctcgttcgatgactgttgaaattatggagggacgtggagttggacca
gacaaggatcacatttacctccaactgcaccatcttccagcagagcaacttcaacaaaga
ttgccaggaatttctgagacagccatgatcttcgccggagttgacgtcaccaaggaacca
atcccagttattccaaccgttcactacaatatgggaggagtaccaaccaactataaggga
caagttctcaactacacacccaaaaagggagatgaagtcgttccaggactttatgctgca
ggagaatgcggagctcactctgtccacggagctaacagacttggagccaactcccttttg
gatttggtcatcttcggaagagcatgcgctattgacatcctcaagaacacctctgccgga
gttggagttccagaacttccaaagaacgccggagaggcctccgttgccaacattgacaaa
ctccgtcacaacaagggagacatctcaactgccgagcttcgtctcaccatgcaaaagtca
atgcaaaaccacgccgccgtattccgtcgtggagatatcttgaaggagggagtcaaggtc
ttatccaagttgtacaaggaccaagctcatctcaacgttgctgacaagggactcgtctgg
aactcggatctcattgagaccctcgagctccagaacttgctcattaacgctacccaaacc
atcgttgccgctgagaacagagaggaatcccgtggagcccacgctcgtgacgacttccct
gacagactcgacgagctcgactacagcaagccattggagggacagaccaagaaggagttg
aaggaccactggcgcaagcattcgatcatcagatcgaacatcgaaacaggagaggtttca
cttgactatcgtccagtcattgacactactctcgacaaaagcgaaaccgactgggtgcca
ccaaaggtccgctcctattag

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