Caenorhabditis elegans (nematode): CELE_C34E10.3
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Entry
CELE_C34E10.3 CDS
T00019
Symbol
gop-1
Name
(RefSeq) Protein CLEC16A homolog
KO
K19513
protein CLEC16A
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_C34E10.3 (gop-1)
03029 Mitochondrial biogenesis [BR:
cel03029
]
CELE_C34E10.3 (gop-1)
Membrane trafficking [BR:
cel04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
CELE_C34E10.3 (gop-1)
Mitochondrial biogenesis [BR:
cel03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
CELE_C34E10.3 (gop-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLEC16A_C
FPL
Flu_NS2
Pox_I3
Motif
Other DBs
NCBI-GeneID:
175721
NCBI-ProteinID:
NP_498117
WormBase:
WBGene00001660
Ensembl:
WBGene00001660
UniProt:
P46578
LinkDB
All DBs
Position
III:5254438..5258886
Genome browser
AA seq
892 aa
AA seq
DB search
MFRKLGSSGSLWKPKNPHSLEYLKYLQGVLTKNEKVTENNKKILVEALRAIAEILIWGDQ
NDASVFDFFLERQMLLYFLKIMEQGNTPLNVQLLQTLNILFENIRHETSLYFLLSNNHVN
SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFFFNETTEEFPLLVEVLKLYNWNES
MVRIAVRNILLNIVRVQDDSMIIFAIKHTKEYLSELIDSLVGLSLEMDTFVRSAENVLAN
RERLRGKVDDLIDLIHYIGELLDVEAVAESLSILVTTRYLSPLLLSSISPRRDNHSLLLT
PISALFFFSEFLLIVRHHETIYTFLSSFLFDTQNTLTTHWIRHNEKYCLEPITLSSPTGE
YVNEDHVFFDFLLEAFDSSQADDSKAFYGLMLIYSMFQNNADVGELLSAANFPVLKESTT
TSLAQQNLARLRIASTSSISKRTRAITEIGVEATEEDEIFHDVPEEQTLEDLVDDVLVDT
ENSAISDPEPKNVESESRSRFQSAVDELPPPSTSGCDGRLFDALSSIIKAVGTDDNRIRP
ITLELACLVIRQILMTVDDEKVHTSLTKLCFEVRLKLLSSIGQYVNGENLFLEWFEDEYA
EFEVNHVNFDIIGHEMLLPPAATPLSNLLLHKRLPSGFEERIRTQIVFYLHIRKLERDLT
GEGDTELPVRVLNSDQEPVAIGDCINLHNSDLLSCTVVPQQLCSLGKPGDRLARFLVTDR
LQLILVEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRHPVLTAK
FIFDDHIRCMAAKQRLTKGRQTARGLKLQAICSALGVPRIDPATMTSSPRMNPFRIVKGC
APGSVRKTVSTSSSSSQGRPGHYSANLRSASRNAGMIPDDPTQPSSSSERRS
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaagcttggttcttctgggtcactatggaagccgaaaaatccgcattctttg
gaatacctcaaatatttacaaggagtgctcacaaaaaatgagaaagttacggaaaacaat
aagaaaatattagtagaagcattacgagctatcgcagaaattctcatttggggcgatcag
aatgatgcttcggtttttgatttcttccttgagcggcaaatgcttctttatttcttgaaa
attatggaacaaggaaacacaccactaaatgtacaattactgcagactttgaacatttta
ttcgaaaatattcgacatgaaacttcactttatttccttctaagtaacaatcatgtaaac
tcgattatttcccacaaattcgatttacaaaatgatgagatcatggcttactacattagt
tttctgaaaactctttcatttaaactgaatccagctacaatccacttcttcttcaatgaa
acgactgaagaatttccattgttggtagaagttttgaagctttataattggaatgaatca
atggttcgaattgctgttagaaatattcttttaaatattgtgagagttcaagatgattca
atgattattttcgctatcaagcatacaaaagaatatctatcggagttaatagattctcta
gttggtctctcacttgaaatggacacatttgtacgatctgctgagaatgtgttagctaat
cgagagagattacgaggaaaagtggatgatttaattgatttgattcattatattggtgaa
ctattggatgtggaagctgtcgccgaaagtttatcaattttagtaacaacacgatactta
agccctctattactttcaagtatatcaccaagaagagataatcattcacttctactcact
ccgatttctgcgttattttttttctctgaatttttattgatagttcgtcaccatgaaaca
atatatacatttttatcatctttcctatttgacactcagaatactttgacgacccattgg
atacgtcataatgagaaatattgcttagaaccgattacattatcatcaccaaccggagaa
tatgtgaatgaagaccacgtatttttcgattttctactggaagcatttgattccagtcaa
gcagacgattcgaaggcattctatggattaatgctgatttattcaatgtttcagaataat
gccgatgttggagaacttctatctgctgccaacttcccagtgctcaaagaatcaacgaca
acttcattagctcaacagaatcttgctcgtctccgaatagcatctacgtcttccatatca
aagcgaacgagagctatcactgaaattggagtagaagcgaccgaggaagatgagattttt
catgatgttcctgaagaacaaacgttggaagatctggtggatgatgtattggttgatact
gaaaattcagcaataagtgatccagaacctaaaaacgtggagtcagaatctcgttctcga
tttcaatctgctgttgatgagcttccacctccgtcgacttctggatgtgatggtcgactt
tttgatgcactttcatcgattatcaaagcagttggaacagatgacaatcgaattcgacca
attacattggaacttgcatgtcttgtaattcggcaaattttaatgactgttgatgatgaa
aaagtacataccagtttaacgaaattatgcttcgaagttcgtctaaaacttttatcatca
attggacaatatgttaatggagagaatctgtttttggagtggtttgaggatgaatatgca
gaatttgaagtgaatcacgtgaatttcgatataatcggtcacgaaatgcttcttcctcca
gctgcaactcctctttcgaatctgctacttcataagcgattgcccagtggatttgaagaa
cgaataagaactcaaatcgtattctacctacatattcgaaaattggaacgagatttgacc
ggtgaaggagacacagaattacctgtgagagtgttgaattctgatcaggaaccagttgcc
atcggtgattgtattaatttacataattcggatcttctatcctgcactgtggttcctcaa
caactatgttctcttggaaaacctggtgatcgtcttgctcgattccttgtcactgataga
cttcaattaattcttgtcgaaccggattctcgaaaagccggatgggcaattgttcgattc
gtaggacttcttcaagatacaacaattaatggagattctacggattcgaaagttttgcat
gttgtggtggaagggcaaccctcgagaattaagaaaagacatccggttttaactgcaaag
ttcatattcgatgatcacattcggtgtatggcagcaaagcaacggctcaccaagggtcgc
caaacagcacgtggtctgaaacttcaggcgatatgttcagctcttggagttccacgtatc
gatccagcgacaatgacgtcatcaccacgaatgaatccattcagaattgtgaaaggatgc
gcaccgggaagtgtacgaaaaactgtttccacatcatcatcgtcaagccaaggacgtccc
ggacattattctgcaaatcttagatcagcatctagaaatgcaggaatgataccagatgat
ccaactcaaccgagtagttcttcggaaagaagatcctag
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