KEGG   Caenorhabditis elegans (nematode): CELE_C47B2.3Help
Entry
CELE_C47B2.3      CDS       T00019                                 

Gene name
tba-2
Definition
(RefSeq) Tubulin alpha-2 chain
  KO
K07374  tubulin alpha
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04145  Phagosome
Brite
KEGG Orthology (KO) [BR:cel00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    CELE_C47B2.3 (tba-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cel03019]
    CELE_C47B2.3 (tba-2)
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_C47B2.3 (tba-2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cel04812]
    CELE_C47B2.3 (tba-2)
   04147 Exosome [BR:cel04147]
    CELE_C47B2.3 (tba-2)
Messenger RNA biogenesis [BR:cel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CELE_C47B2.3 (tba-2)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     CELE_C47B2.3 (tba-2)
Cytoskeleton proteins [BR:cel04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    CELE_C47B2.3 (tba-2)
Exosome [BR:cel04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CELE_C47B2.3 (tba-2)
  Exosomal proteins of other body fluids (saliva and urine)
   CELE_C47B2.3 (tba-2)
  Exosomal proteins of colorectal cancer cells
   CELE_C47B2.3 (tba-2)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Tubulin_2
Motif
Other DBs
NCBI-GeneID: 173167
NCBI-ProteinID: NP_001021050
WormBase: WBGene00006529
Ensembl: WBGene00006529
UniProt: P34690
LinkDB All DBs
Structure
PDB: 

Position
I:complement(join(12964814..12964946,12965000..12965520,12965571..12966263))
Genome map
AA seq 448 aa AA seqDB search
MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV
PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI
RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITASL
RFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQM
VKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTV
VPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR
EDLAALEKDYEEVGADSNEGGEEEGEEY
NT seq 1347 nt NT seq  +upstreamnt  +downstreamnt
atgcgtgaggtcatctctatccacgtcggacaagccggagtccaaatcggaaacgcctgc
tgggagctctactgcctcgagcacggaatccagcccgatggaaccatgccaactcaatca
acgaacgagggagagtcgttcaccactttcttctcagacaccggatccggccgttacgtt
ccaagatccatcttcgtcgatctcgagccaactgtcgttgacgagattcgcactggaacc
tacaagaagctcttccatccagagcagatgatcaccggaaaggaagacgccgctaacaac
tacgctcgtggacactacaccgtcggaaaggagctcatcgacaccgtcctcgacaggatc
cgtcgtctcgctgataactgcagtggactccaaggattcttcgtcttccactccttcgga
ggaggtaccggatccggattcacttcgcttcttatggaacgtctttccgtcgactacgga
aagaagtccaagctcgagttctccatctacccagctccacaggtctcaaccgccgtcgtt
gagccatacaactcgatcctcaccacccataccaccttggagcactccgactgcgccttc
atggtcgataacgaggccatctacgacatctgccgcagaaacttggatgttgagcgacca
agctacaccaacctcaacagaatcatctcccaggttgtctcctcaatcactgcttccttg
agattcgatggagccctcaacgttgatctcaacgagttccagaccaacttggtgccatac
ccaagaattcacttcccattggccgcctacactccactcatctctgctgagaaggcctac
cacgaggctctgtccgtcagcgacatcaccaatagctgcttcgagccggctaaccagatg
gtcaagtgtgatccacgtcacggaaagtacatggctgtgtgcctcttgtacagaggagac
gtcgttccaaaggacgttaacaccgccatcgctgcaatcaagaccaagagaaccatccaa
ttcgtcgattggtgcccaaccggattcaaggtcggaatcaactaccagccaccaactgtt
gtgccaggaggtgatcttgccaaggtgccacgcgccgtctgcatgctctccaacactacc
gccatcgctgaggcctggtctcgtctcgactacaagttcgacttgatgtacgccaagcgt
gccttcgtccactggtacgtcggagaaggtatggaggaaggagagttcaccgaggctcgt
gaggacttggctgctctcgagaaggactacgaagaggtcggagctgactccaacgaggga
ggagaagaggagggagaggagtactag

DBGET integrated database retrieval system