KEGG   Caenorhabditis elegans (nematode): CELE_F40F4.5Help
Entry
CELE_F40F4.5      CDS       T00019                                 

Gene name
tba-9
Definition
(RefSeq) Tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04145  Phagosome
Brite
KEGG Orthology (KO) [BR:cel00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    CELE_F40F4.5 (tba-9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cel03019]
    CELE_F40F4.5 (tba-9)
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_F40F4.5 (tba-9)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cel04812]
    CELE_F40F4.5 (tba-9)
   04147 Exosome [BR:cel04147]
    CELE_F40F4.5 (tba-9)
Messenger RNA biogenesis [BR:cel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CELE_F40F4.5 (tba-9)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     CELE_F40F4.5 (tba-9)
Cytoskeleton proteins [BR:cel04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    CELE_F40F4.5 (tba-9)
Exosome [BR:cel04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CELE_F40F4.5 (tba-9)
  Exosomal proteins of other body fluids (saliva and urine)
   CELE_F40F4.5 (tba-9)
  Exosomal proteins of colorectal cancer cells
   CELE_F40F4.5 (tba-9)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Motif
Other DBs
NCBI-GeneID: 185538
NCBI-ProteinID: NP_508555
WormBase: WBGene00006535
Ensembl: WBGene00006535
UniProt: Q20221
LinkDB All DBs
Position
X:join(3252963..3252980,3253026..3253149,3253196..3253294,3254327..3254499,3254548..3255009,3255051..3255128,3255619..3255735,3255821..3255984,3256041..3256176)
Genome map
AA seq 456 aa AA seqDB search
MVNNRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSE
TMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEII
DVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAP
QVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVI
SSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQC
FEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGI
NYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE
GEFSEAREDLAALEKDYEEVGLDAGEPDEEDDYSHY
NT seq 1371 nt NT seq  +upstreamnt  +downstreamnt
atggtcaacaatcgctcgcgtgaagtgatttcaattcacgtgggccaggctggagttcaa
atgggaaatgcctgctgggagttgtactgcctggaacatggaattcaacctgatggaatg
atcaatgaagaggacagcttaggtgtggacgacgactcattcaacacattcttctcggaa
acgatggctggcaagcatgtaccacgcgctataatggtcgatttggagccgaccccgatt
gatgagattcgcaccggaacatacaaaaccctgtttcacccggaacagcttttgactgga
aaagaagacgcggccaacaactacgcccgtgggcattatactattggaaaggaaatcatc
gatgttgttatggatcgtgtacggcgtctcgtcgaaaattgtagagggctgcagggtttt
cttgtgttccattctttcggtggaggtactggaagtgggtttacagctctgctgatggaa
cgtttatcagtggattatggaaaaaagagcaagttggaattttgcatttacccagctccg
caagtatcaacttccatggtggagccgtataactctatcttaacaactcacacaactctt
gagcactccgattgctcatttatggtagataatgaggcgatctatgatatttgccgtcga
aacctggaccttgctcgtccgacctacaccaatctgaatcgactgattgcgcaagttatc
agttcagtcaccgcatcacttcgttttgatggcgctttgaatgtggatctgacagagttt
caaactaatctggttccatacccaagaattcattttcctctgacaacatatgccccaatt
atttccgctgaaaaagcataccacgagcaaatgacggttgctgaaatcacccaacaatgt
ttcgagccaggagcgcaaatggtcaaatgtgatccaagaagaggaaaatatatggcttgc
tgtttactgtacagaggagatgtagttccgaaagacgtcaacgctgcaattgcatcagtt
aaaacaaaacgttcgattcaatttgtcgactggtgcccaacaggattcaaggtcggcatc
aactaccaacctccaactgtggtccctggtgctgatctctcaaagctccaacgcgctgtg
tgcatgctctccaacacaacagctatcgcagaggcatgggctcgtcttgatcacaagttt
gatttgatgtacgcgaagagagcatttgttcactggtatgttggtgagggcatggaggaa
ggagaatttagcgaggcgagagaggatttagcagcattggaaaaagactatgaagaagtt
ggactggatgcaggagaacctgatgaggaggatgattacagtcattattga

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