KEGG   Caenorhabditis elegans (nematode): CELE_F44F4.11Help
Entry
CELE_F44F4.11     CDS       T00019                                 

Gene name
tba-4
Definition
(RefSeq) Tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04145  Phagosome
Brite
KEGG Orthology (KO) [BR:cel00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    CELE_F44F4.11 (tba-4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cel03019]
    CELE_F44F4.11 (tba-4)
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_F44F4.11 (tba-4)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cel04812]
    CELE_F44F4.11 (tba-4)
   04147 Exosome [BR:cel04147]
    CELE_F44F4.11 (tba-4)
Messenger RNA biogenesis [BR:cel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CELE_F44F4.11 (tba-4)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     CELE_F44F4.11 (tba-4)
Cytoskeleton proteins [BR:cel04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    CELE_F44F4.11 (tba-4)
Exosome [BR:cel04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CELE_F44F4.11 (tba-4)
  Exosomal proteins of other body fluids (saliva and urine)
   CELE_F44F4.11 (tba-4)
  Exosomal proteins of colorectal cancer cells
   CELE_F44F4.11 (tba-4)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Motif
Other DBs
NCBI-GeneID: 174680
NCBI-ProteinID: NP_496351
WormBase: WBGene00006530
Ensembl: WBGene00006530
UniProt: G5EDD4
LinkDB All DBs
Position
II:join(10918718..10919410,10919464..10919984,10920030..10920162)
Genome map
AA seq 448 aa AA seqDB search
MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV
PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI
RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITASL
RFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQM
VKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTV
VPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR
EDLAALEKDYEEVGADSNEGLEEDGEEY
NT seq 1347 nt NT seq  +upstreamnt  +downstreamnt
atgcgtgaggtaatctccattcacgttggacaggcgggagttcaaattggaaatgcttgc
tgggaactatactgtctcgagcacggaattcaacccgatggaactatgccttctgagcaa
caaaatgagggtggatccttcaccacgttcttctcagatactggaaatggacgctatgtt
ccgagatctatttttgtggatcttgagccaacagtcgtcgacgagatccgcactggaaac
tacaagaagctgttccatccagaacaaatgatcactgggaaggaagacgctgctaataac
tatgctcgtggtcactacaccgttggcaaggagctcatcgacactactcttgacagaatc
cgtcgtctcgccgacaactgtagtggtcttcaaggattctttgtcttccactccttcggt
ggaggtactggatccggattcacctcactgctgatggaacgtttgtcggttgactacgga
aagaagtcgaaactagagttttcaatctatccagctccacaagtttccactgcagtcgtt
gagccatacaactcgatccttactactcatactactttggagcactccgattgtgcattc
atggttgataacgaggcgatctacgacatttgcaagcgaaatttggatgttgaccgaccg
agttacaccaatctcaacagaattatctctcaggttgtgtcttcaatcaccgcttcactc
agatttgacggagctctcaacgtggatctcaacgagttccagaccaacttggtgccatac
ccaagaattcatttcccattggcctcttacactccattgatctctgccgagaaggcatat
cacgaggctctgtctgtcaatgacatcaccaatagctgcttcgaaccagcaaatcagatg
gtcaaatgtgatccacgcaacggaaagtacatggctgtctgtcttctgtaccgcggagat
gttgtgccgaaggatgtgaacactgcaattactgccatcaaaaccaagagatcagttcaa
tttgtggattggtgcccaactgggttcaaggttggaatcaactaccaaccaccaactgtg
gttccaggaggtgatcttgccaaggtgccacgcgccgtgtgcatgctctccaacactacg
gctatcgccgaggcctggtcccgcctggactacaagtttgacttgatgtacgccaagcgc
gcctttgttcactggtacgtcggagaaggaatggaagagggagagttcactgaggctcgt
gaagacttggcagctctcgagaaggactacgaagaggtcggagctgattccaacgaggga
ttggaagaagacggagaagagtattga

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