Caenorhabditis elegans (nematode): CELE_Y47D3A.26
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Entry
CELE_Y47D3A.26 CDS
T00019
Symbol
smc-3
Name
(RefSeq) Structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_Y47D3A.26 (smc-3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cel00535
]
CELE_Y47D3A.26 (smc-3)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
CELE_Y47D3A.26 (smc-3)
Meiosis-specific proteins
Cohesin complex and associated proteins
CELE_Y47D3A.26 (smc-3)
Proteoglycans [BR:
cel00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
CELE_Y47D3A.26 (smc-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
176559
NCBI-ProteinID:
NP_001255118
WormBase:
WBGene00004873
UniProt:
B2FDA8
LinkDB
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Position
III:<11290904..>11306247
Genome browser
AA seq
1205 aa
AA seq
DB search
MKIKEVRITGFRSYKDNTNVSGFSPRSNVVVGRNGSGKSNFFHAIQFVLSDEYAHLKEEQ
RLGLLHESTGPKVAHARVEITFDNSEKRLMAFENSEVKIVRQVGKKKDQYYIDNKMVPRA
EVVNLMESAGFSRSNPYYIVKQGKINELATSPDAYKLKLLREVAGTRVYDERKEESLKIL
KETKMKTEKIQGLLKYIDERLQTLENEKEDLKEYQKLDKTKRSVEYTMYDNTNKEAIKEK
TKLDEQKVELNQKDNNVKSQLNDVIAEMAKLKTDKKKLESLGRGLREDKETLQAEETKMV
EEKMTLKLEIDSLNEENTRERQGRQNAEHSLQGVGDEIFKNEEELDTIKPEYAKLLEEES
RLKTDIRIDESRAKEILAKQGQRSQFSSVDDRDKFLRNEIRRISGLIADNKEREETIQKE
LADVEREDEKLNNEIQSISRTIDENRYEMDTFAAKSTSLKQEYDAAYVAQQTAAREEKAI
RDKIGNTEQDISAANDQLRRIVARPVYNGITGVRKVIEEFKHDNRNGQHDDVINGYYGTV
IELAEVPDMFRTAVEVIAQNRLFYHVVETDRIATKILRKFNEMQLPGEINFFPMNRVSAP
RQRDLSNNSNARPMSDVIDYEVQYDKVFKSITANVIIVRTLDQAARDLRNEGFDVVSVDG
DQMSKKGVMTGGFIDKKRSKLELHTQKDRFTKELAELQKSLAEAEKMVRERTQEAEKIRN
RMQQHENQIGDFHRKHRELTEAKNAISQQFYMVTSTKEPKKDQLLGIKNHLRELLAQKEN
FEQEIGSNMSSQLTSDEEQTVKKLRKKVDEMTKQLATVSRRRMDLMHRKNAIENLLTKKL
YKTKESLTARVDDISDNERRHKLENANAQLTSLLTRMESTRKQLATAISELQDYETKEKA
LQINIDNVLEQQRDLEKQQADFQLQYDKITAKEDEVKQKREDSLKKMRLLGALPTDTFSK
WQNVKPRELEKKLLECVNELKKYENVNKKALDQYMTASSQKEELTKRMAEQKKSEDSIEE
LLKVLENRKYEAIDLTFKQVKKNFEQVFKQLVPHGRGKMQMRAREQRDDEEGINSVELYE
GISVLVSFVSDDGDSETREMTQLSGGQKSLVALAIIFSIQKCDPAPFYLFDEIDAALDAQ
HRKSVADMIQSLSDQAQFVTTTFRPELLATAEKFYGVRFRNKVSHIDSVTREQAYDFVED
DTTHG
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaagaagtgagaatcaccggctttcgaagctacaaagacaacaccaatgtg
tcgggcttcagtccacgctcgaacgtcgtcgtcggacgaaatggatcgggaaaatccaat
tttttccatgcgattcaattcgttctttccgatgaatatgctcatttgaaagaagaacaa
cgtcttggtctgcttcacgagagtaccggaccgaaagtcgcccacgctcgtgtcgaaatc
acctttgacaactcggaaaagcgtctaatggcgtttgaaaattcagaagtgaagattgtt
cgtcaagttggaaagaaaaaggatcaatattacattgataataaaatggtgccacgtgcc
gaggtggtaaatctcatggaatccgccggattttctcgctcaaacccgtattacatcgtt
aaacagggaaaaatcaacgagttggccacttcgccggacgcttataagctaaagctactg
agagaagtcgccggaacacgagtttacgatgaaagaaaggaagaaagtctgaaaatcctg
aaggaaaccaagatgaaaacggaaaaaatccaaggccttctgaaatacattgacgaacga
ctccaaactcttgaaaacgagaaagaagatttgaaagaatatcagaaattggataaaacg
aagcgaagtgttgaatatacaatgtatgataatacaaataaagaagcgataaaagagaaa
acaaagcttgatgaacagaaagttgaactgaatcaaaaggataataatgtgaaaagtcag
ttgaatgatgttattgctgaaatggcaaagcttaaaactgataagaagaagctggaatca
cttggaagaggacttcgtgaggataaagagacacttcaggctgaggaaactaaaatggtt
gaggagaaaatgacgttgaagcttgaaattgactcgttgaatgaggagaatacaagagaa
cgccagggacgtcaaaacgcggaacactcgcttcaaggtgtcggtgatgagattttcaag
aacgaggaggagctcgatacgattaagcctgaatatgctaagcttctggaagaggaatcc
cgtctgaaaaccgacatcagaattgacgaatcccgtgcaaaagagattctcgcaaaacag
ggccaacgcagtcaattctcgtcggtcgatgatcgtgataagttccttcgtaacgagatt
cgtcgtatttctggattaattgctgataataaggaaagagaagagacgattcaaaaagaa
ttggcagatgttgaacgagaagacgagaagctgaataatgagatacagagtatcagccgt
acaatcgacgaaaatcgctacgaaatggacacttttgccgctaaatcgacatctctgaaa
caggaatacgatgcggcttatgtggctcaacaaacggccgcccgtgaagaaaaggcgatt
cgagacaaaattggcaataccgaacaggatatttcagcggcaaatgatcaattgagacgt
attgtcgcacggccagtatacaatggaatcacaggagtccgtaaagtaattgaagagttt
aaacacgataatcgtaatggacaacacgatgacgtcatcaatggatattatggtactgtc
attgagttggcagaagttccggatatgtttaggacagctgtcgaggttattgcacagaat
cgacttttctatcatgtcgtcgagactgatcgaatcgccacgaaaatcctccgaaaattc
aacgaaatgcaactgcccggcgagattaatttcttcccgatgaaccgtgtgtcggcgcca
agacaacgcgatttgtccaataattcgaacgctcgcccaatgtctgatgtgatcgattac
gaggttcaatacgataaagtgttcaaatcaatcacagcgaacgtgataatcgtccgaact
cttgatcaagctgctcgtgatcttcgtaacgagggattcgacgtcgtatcagttgacgga
gatcaaatgtcgaagaaaggagtaatgacgggaggatttatcgacaaaaagcgtagtaaa
ctcgagcttcacactcagaaagatcgattcacgaaagagctcgccgagctgcagaaaagt
ttggcagaagccgagaaaatggttcgagagaggacacaggaagcggaaaagatccgaaat
cgtatgcaacagcacgagaatcagattggagactttcaccggaagcaccgagagctcacg
gaggctaaaaatgcgattagtcagcaattctatatggttacgagcacaaaagagccgaaa
aaggatcaactgctcgggattaagaatcatctacgagagcttttggctcaaaaggagaac
tttgagcaggagattggatcgaatatgagctcacagttgacttctgatgaagagcagact
gttaagaagctaaggaaaaaagtggacgaaatgacaaagcaactggcaacggtgtcgcgt
cgacgaatggatcttatgcatcgaaaaaatgcgattgagaatcttttgacaaagaaattg
tacaaaacgaaggagagcctcactgcgcgagtcgacgacatttccgacaacgaacgccgg
cacaaacttgaaaatgcgaatgctcaactgacatcactgctcacgagaatggaatccacc
cgaaaacaactggcgactgcaatttcagaacttcaagattatgagacaaaagagaaggct
cttcagattaatattgataatgttttggagcaacaacgagatttggagaagcagcaagcg
gatttccagctgcaatatgataaaattacagcaaaagaggatgaagttaagcagaagaga
gaggatagcttgaaaaagatgcgccttctcggtgcccttccaacggatacattctcgaaa
tggcaaaacgtgaagcctcgtgagctggagaagaagctgctcgagtgtgtaaatgagttg
aaaaagtatgagaatgtgaacaaaaaggcgttggatcaatatatgactgcatcgtcacaa
aaggaagagctcacgaaacgaatggccgaacagaagaagagtgaagattcaatcgaggag
cttctcaaagtgctcgaaaatcgcaagtacgaggcgattgatttgacgtttaagcaggtc
aagaagaactttgaacaagttttcaagcaacttgtgccgcatggccgcggaaaaatgcaa
atgagagcccgtgagcaacgtgacgatgaggaaggtatcaattcagtagagctgtacgaa
ggaatctctgtacttgtctcctttgtatcagatgatggagattcagaaacacgtgaaatg
acacaattgtctggtggacaaaagtctcttgttgcgttggctatcattttctcgattcag
aaatgcgaccccgctccattctacttgtttgacgaaatcgacgcggctctcgatgctcaa
cacagaaaatctgtggctgacatgattcaatctctatcggatcaggcacaattcgtcact
accaccttccgaccggagttgctcgccaccgccgaaaaattctacggagttcgtttccgt
aacaaggtctctcacattgattcggtcactcgtgaacaggcttacgattttgttgaggat
gacaccacacatggataa
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