Cellulomonas sp. H30R-01: GXP71_17155
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Entry
GXP71_17155 CDS
T06411
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
celh
Cellulomonas sp. H30R-01
Pathway
celh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
celh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXP71_17155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
celh03019
]
GXP71_17155
03400 DNA repair and recombination proteins [BR:
celh03400
]
GXP71_17155
Enzymes [BR:
celh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXP71_17155
Messenger RNA biogenesis [BR:
celh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GXP71_17155
DNA repair and recombination proteins [BR:
celh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GXP71_17155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
AAA_30
ResIII
DprA_WH
HTH_Crp_2
DUF3553
HTH_36
TrmB
MarR_2
ApbA
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QHT57629
UniProt:
A0A6C0FRQ7
LinkDB
All DBs
Position
complement(3848551..3850170)
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AA seq
539 aa
AA seq
DB search
MPTALPPVRGVALDDAVTQVLGPDATLRDAQADALRGLAERDTLLVARTGAGKSAVYAIT
TLVAARLTLVVSPLVALQRDQAQSLREVGLRAATVSSAVSRARQAQALDDAAHGRLDVLL
LAPEQLHRGPVVEALRDADVGLVVVDEAHCVSEWGHDFRPDYLHVASAVRALGGPRVLAM
TATASAHARDEIVERLGLHDPRVLVHDADRPNIWLGAVPASTPADRDARVVDEVLATDGA
VVVYARTRSHTEELAELLDRAGRPALVYHAGLPAKERARVQDTFLDGRHDTVVATSAFGM
GVDRADVRAVVHAGPPPSLDAYYQEVGRAGRDEEPARAVVVHRPDDTALNRFLRSGGGAK
PGTLRAVLAATSDGPADRATVAERSGLGARTVSRALAELAAAGAVRDEDGLWTATGTSAG
EAVAAVTEARERRATLDASRVELVRTYTDTTDCRRRLLLELLGEVRPDPCGACDSCDRGT
SAPARSTGVRPGQAVRHERFGDGTVSVVEADRLTVLFEEHGYVTLDAAVALDSELLTVR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
gtgccgactgccctgccgcccgtccgcggagtcgccctcgacgacgccgtcacgcaggtg
ctcggaccggacgcgacgctgcgcgacgcgcaggccgacgcgctgcgggggctcgccgag
cgggacacgctgctcgtcgcccggaccggtgcgggcaagtccgcggtgtacgcgatcacg
acgctggtcgccgcgcggctcaccctcgtcgtctcacccctcgtcgcgctgcagcgcgac
caggcgcagtcgctgcgggaggtcggcctgcgggcggcgacggtgagctcggcggtgtcg
cgcgcccgtcaggcgcaggcgctcgacgacgcggcgcacgggcggctcgacgtgctgctc
ctcgcacccgagcagctgcaccgcgggcccgtggtcgaggcgctgcgggacgccgacgtc
ggactggtggtcgtcgacgaggcgcactgcgtgagcgagtggggtcacgacttccggccc
gactacctgcacgtcgcgtcggcggtgcgcgcgctgggcggaccgcgcgtgctcgcgatg
acggcgaccgcgtcggcgcacgcgcgcgacgagatcgtcgagcggctgggcctgcacgac
ccgcgcgtgctcgtgcacgacgccgaccgcccgaacatctggctcggtgcggtccccgcg
tcgacaccggccgaccgcgacgcacgcgtcgtcgacgaggtcctcgccacggacggtgcg
gtcgtcgtgtacgcgcgcacccggtcgcacaccgaggagctcgccgagctcctggaccgc
gccggacggcccgcgctcgtctaccacgcgggcctcccggcgaaggagcgggcgcgcgtg
caggacacgttcctcgacgggcggcacgacacggtcgtcgcgacgagcgcgttcggcatg
ggcgtcgaccgggccgacgtgcgggccgtcgtgcacgcgggtccgccgccgtcgctcgac
gcgtactaccaggaggtgggccgggcgggacgcgacgaggagcccgcgcgggcggtcgtc
gtgcaccggcccgacgacaccgcgctcaaccggttcctgcgcagcggcggcggtgccaag
cccggcacgctgcgtgcggtgctcgcggccacgtcggacggcccggcggaccgggcgacc
gtcgccgagcgctcgggtctgggcgcccggacggtgtcgcgtgcgctcgccgagctcgcc
gcggccggtgcggtacgtgacgaggacgggctctggaccgcgacgggcacgtccgcgggc
gaggccgtggccgccgtcaccgaggcccgcgagcgccgcgcgaccctcgacgcgtcgcgc
gtcgagctcgtccggacgtacacggacacgaccgactgccgccggcgcctgctgctcgag
ctgctgggcgaggtgcgccccgacccgtgcggcgcgtgcgactcgtgcgaccgcgggacg
agcgcaccggcccgctcgacgggcgtccgtccggggcaggcggtgcggcacgagcggttc
ggcgacggcaccgtctcggtcgtcgaggcggaccggctcacggtcctgttcgaggagcac
gggtacgtgacgctcgacgccgcggtggcgctcgactcggagctgctgaccgtccgctga
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