Cedecea neteri M006: LH23_19475
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Entry
LH23_19475 CDS
T03328
Name
(GenBank) fimbrial protein
KO
K07347
outer membrane usher protein
Organism
cem
Cedecea neteri M006
Pathway
cem02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LH23_19475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cem02000
]
LH23_19475
02044 Secretion system [BR:
cem02044
]
LH23_19475
02035 Bacterial motility proteins [BR:
cem02035
]
LH23_19475
Transporters [BR:
cem02000
]
Other transporters
Pores ion channels [TC:
1
]
LH23_19475
Secretion system [BR:
cem02044
]
Chaperone-usher system
Type 1 pilus assembly protein
LH23_19475
Bacterial motility proteins [BR:
cem02035
]
Pilus system
Fimbrial proteins
LH23_19475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
Big_15
Motif
Other DBs
NCBI-ProteinID:
AIR62765
LinkDB
All DBs
Position
complement(4114791..4117070)
Genome browser
AA seq
759 aa
AA seq
DB search
MTAAQNTNNDLPQNAASNDTAQPVGVDLYLDTTVNGNAVGLVHLGYAQGKLYGDAMALRQ
LGFRLPENAKPPYYLDDIAQVKVDYNVQQQTLALTAPLSLLDLKTTQLNQSDMSAPKAAN
AFGALLNYDLYGDSGKSNNFNTFSEFRAFNSAGVLSSTQLTRYSTEQNSNQSFSRLDTSW
RTSFPDKMLAVTLGDTLTSSLSWSRQTRIAGVKIGTDFGLNPYMPTTPLPAFLGSATLPS
SVELYVNGVKYYNGEVPAGSFQLNTLPNITGAGDAQVMMTDALGRTSVQNFSFYNDQLLL
REGLTDWSLELGVVRKNYGYSSFDYASEPAISGTWRRGFSNSLTAGGHMEASDSLVNGGV
SSDWIPWSQSGTISTALAASSDAGESGYLYSLGYRWSGGRFNFSSSATATSGDYHDVATR
YGAPPAAFSGSAVVGYNFGVGGNLSLSYLQFRYPDQSAIRYANASWFKPITENISLSASF
NQNIDDTRDRSVYLMLTVSTSNSLTAGATVQRTGDKMGYQLNASQNPPSEGGVGWNVAAS
QQSSQQTGQGEVGYLGRYGRVYTGFRSIPDNNYGYAGATGSLVMMGGGVFAAREINNGFA
VVSTDGIPDVPVKLQHNLVGNSDSSGRLLVTPLNSYQNNLISIDPMNLPANMRIRSVSLN
ATPADRSGTLVNFDIKPVRAAQISLVDAKGKTIAEGSPVRLMTGIGQDSIVGFDGMTYFD
ALELHNQLRVTTGSGICVAEFDYPENQKNVPTIGPVVCR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagcacaaaatactaataatgacttacctcagaatgcggccagcaatgataca
gctcagcctgtaggcgtggatttatatctggacacgacggtgaacgggaatgccgtgggt
ctggttcatcttggctacgcgcagggaaaactttacggcgacgcaatggccctgcgtcag
ttgggatttcgcctgccggaaaatgcaaagccgccgtattacctggatgacattgctcag
gtcaaagttgactataacgtccagcaacaaaccctggccctgaccgcaccgctaagcctg
ttagatctgaaaaccacccagctcaaccagtccgacatgtctgcgccgaaggccgccaat
gcctttggggcattgctgaattacgacctctacggcgacagtggcaagagcaacaacttc
aacacgttcagtgagttccgtgcgtttaactcggcaggcgtcctgagttcgacccagctt
acccgctacagcacggaacagaatagcaatcagtcttttagccgcctggacaccagctgg
cgcacctcctttcccgataaaatgctggcggtaaccctcggcgatacgctcaccagctcg
ctttcttggtcccgccagacccgcattgccggggtgaaaattgggacggattttggcctc
aacccttatatgccgacgacgccgctgcccgcgtttctgggttcggccacgctgccctca
agcgttgagctgtatgtcaacggggtaaaatactataacggcgaggttccggcgggcagt
ttccagttaaatacgctgccaaacatcaccggcgcaggggatgctcaggtgatgatgact
gatgccctcggcagaaccagcgtgcagaacttctctttttacaacgatcagcttctgctg
agggaaggattgacggactggtcgcttgagctgggcgtggtcagaaaaaactacggctat
tcctctttcgattacgccagcgaaccggcgatcagcggcacctggcgacgtggctttagc
aacagcctgactgcaggcggccatatggaggccagcgacagcctggtcaacgggggcgtt
agcagcgactggatcccctggagtcagtccgggacgatttcaaccgcgctggcggcaagc
tcggacgccggggagagcggctatttatatagtctcgggtaccgctggtccggcgggcgc
ttcaactttagctccagcgccacggctacctccggcgactatcacgatgtggcgacgcgg
tatggcgccccgccggctgccttcagcggcagcgcggtggtggggtataactttggcgta
ggggggaatctcagtctgagttacctgcagtttcgctaccctgaccaaagcgctattcgt
tacgccaacgccagctggtttaaaccgatcacggaaaacatctctttaagcgccagcttt
aaccagaacattgatgatacccgcgaccgcagcgtctacctgatgttgacagtcagtacc
agcaatagcctgacggccggcgcgacagtgcagcgcaccggtgacaagatgggctaccag
ctcaatgccagccagaatccaccgtccgagggcggtgtcggctggaacgtagctgccagc
cagcaaagttcccagcaaaccgggcagggcgaagtgggttacctggggcgctatggccgc
gtatataccggcttccgcagcattcctgacaacaattatggctatgcgggggcgacgggg
tcgctggtgatgatgggcggcggcgtttttgccgcccgggaaatcaacaacgggtttgcc
gtggtctctacggacgggatccccgatgtaccggtcaagctgcagcataatctggtaggc
aacagcgacagcagcggacggctgctggtgacgccgctcaacagctaccagaacaacctg
atcagtatcgatccgatgaacctgccggccaacatgcggatccgcagcgttagcctgaac
gcgaccccagccgaccgctccgggacgctggtgaattttgatatcaagccggttcgcgct
gcccagataagtctggttgacgctaaaggcaaaactatcgccgaaggcagcccggtcagg
ctgatgacgggcatcgggcaggactcgattgtcgggtttgatggcatgacctatttcgat
gcgcttgagctacataatcagctccgggtgacgacaggaagcggcatttgtgtggctgag
tttgactatccagagaatcagaaaaacgtaccgactattggcccggttgtgtgccgatag
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