Crinalium epipsammum: Cri9333_0083
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Entry
Cri9333_0083 CDS
T02373
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cep
Crinalium epipsammum
Pathway
cep03410
Base excision repair
cep03430
Mismatch repair
cep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cri9333_0083
03430 Mismatch repair
Cri9333_0083
03440 Homologous recombination
Cri9333_0083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cep03400
]
Cri9333_0083
DNA repair and recombination proteins [BR:
cep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Cri9333_0083
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cri9333_0083
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cri9333_0083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFZ11083
UniProt:
K9VSR0
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All DBs
Position
112109..114238
Genome browser
AA seq
709 aa
AA seq
DB search
MKLPNHRWQIAPAQVELAQKLAEVTHLSPLIAQVLINRGIETPEQAQLYLNPESSVLPAP
VDEFPDLAMSVELLKEAIATKQKIAICGDYDADGMTSTALLLRALRWLDAQVDYAIPSRM
KDGYGINIRIVEEFYAEGVQLILTVDNGISAVEPIARARELGIKVIITDHHDLPSVLPPA
DAILNPKLIPESSPYRGVAGVGVAYILAVCLAQSLGKHQGLITQLLELFTLGTIADLAPL
TGVNRRWLKRGLRLLPESQITGVQALIQIAGVQQSTDNSTKENPNSNTTQANIKGKVENT
NPKCLKPEDIGFRLGPRINAIGRLADPQIVIDLLTTTDMGIALERAMQCEQINRHRQQLC
EQIELSAISHIETNHLNLHQQRILLIVQPDWHHGVIGIVASRLLERYGVPVFIGTYEHPA
THDNELTPHPTDNPSATSATKSVAREIRGSARGIPEFHIFEALEYCKDLLTKYGGHKAAG
GFSFPAENLEELRSRLSEFAHQCLEPEHLKPLISIDAQANLEQINLDLYQQIDALHPCGI
ENPDPIFWTSNVRVIEQQQVGKGHIKLTLSSNNPPFPIKAIAWRWSEYLPLPSRVDIAYK
LRQNTWNGNTSIELELVSIRPVAITSALSIHHSAEFDYNQRQYSCSLSESLQEIRIQNPE
GKILAVQKGQKTGILAKTPEHTSEVDITKPPYYSLIKAAMSALKIPTNQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcctaatcatcgttggcagattgcccctgcccaggtagaattagctcaaaaa
ttagcggaagttacccatctctcacccctaatagcccaagtattaattaatcgtgggata
gaaacgccagaacaagcgcagttgtacttaaatcccgaatcatcggtattacctgcgcca
gttgatgagtttcccgatttagcaatgagtgtcgagttgttaaaggaagcgatcgcaact
aaacaaaaaattgctatctgtggtgactatgatgctgatggtatgactagcactgcttta
ttacttagagcattacgctggttagatgcccaagtagattatgccatccctagtcggatg
aaagatggctacggcatcaatatccgaattgtcgaagaattttatgctgaaggtgtccaa
ctaattctcactgtagataatggcatttccgcagtagaaccaattgcgagggcgcgagaa
ctcggcatcaaagttattatcacagatcaccacgatctcccctcagtactacctccagct
gatgctatcctcaatcccaaactaattcctgaatcttctccctatcgtggtgtagctgga
gtaggagttgcttatattttggcagtttgtcttgctcaaagtttaggtaaacatcaagga
ttaattacacagctactagaattatttacccttggaaccattgcagatttagcacccctc
acaggggttaaccgtcgctggttaaaacgaggtttacgactactacccgaatctcaaatt
acaggcgtacaagctttaatccagatagcaggggtacaacagtcaacagataactctaca
aaagaaaaccccaactccaacactacccaagcaaatatcaagggtaaagttgaaaacaca
aatcccaaatgccttaaaccagaagatattggttttcgccttggtcctcgcattaatgct
ataggaagacttgctgatccccaaattgtgatcgacctcctcacgacaacagacatggga
atagcactagagagggcgatgcagtgcgaacaaatcaaccgacacagacagcaactttgt
gaacaaattgaacttagtgcgatctcgcacatcgaaaccaatcacctcaacctacaccag
caaaggatcttactaatagtccaacccgattggcatcatggtgtaataggcatagtcgcc
tctcgtctcctagaacgctacggcgtaccagtcttcattggcacctacgaacacccagca
acccatgacaatgaattaaccccacatcccacagataacccatccgctacatccgctaca
aaatccgttgccagggagattcgtggttcagcaagaggaattcctgaattccacatcttt
gaagccttagaatattgcaaagatttactaactaaatatggtggacataaagcagcaggt
ggattttctttccctgccgaaaacttagaagaattgcgatcgcgcttaagcgaatttgct
caccaatgcttagaaccagaacatctcaaacctctaatttctatagatgcccaagctaac
ttagaacaaatcaatttagatttataccaacaaattgatgccttacatccctgtggaatt
gaaaaccctgaccctattttctggacttctaatgttcgagtaatcgagcaacaacaagtt
ggcaaaggtcatattaaactaactctttcatcaaataacccaccattcccaattaaagca
atagcatggcgctggagcgagtatttacctctaccatcacgagtagatatagcctacaaa
ttacgccaaaacacttggaatggtaacactagcatcgagctagaattagtcagcattcga
cctgtagcaataacttcagcattatcaattcatcatagtgctgagtttgattacaatcaa
cgccaatatagctgtagcctgtctgaatcgttacaagaaatcagaattcaaaatcctgaa
ggcaaaattctagcagttcaaaaaggacaaaaaaccggaattttggctaaaacgccagaa
catacttctgaagtcgatattacaaaaccgccttattattcactaataaaagcggctatg
agtgctttaaaaatccctaccaatcaatga
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