Crinalium epipsammum: Cri9333_1386
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Entry
Cri9333_1386 CDS
T02373
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cep
Crinalium epipsammum
Pathway
cep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cri9333_1386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cep03019
]
Cri9333_1386
03016 Transfer RNA biogenesis [BR:
cep03016
]
Cri9333_1386
Enzymes [BR:
cep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cri9333_1386
Messenger RNA biogenesis [BR:
cep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cri9333_1386
Transfer RNA biogenesis [BR:
cep03016
]
Prokaryotic type
tRNA degradation factors
Cri9333_1386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
KhpA-B_KH
aRib
Motif
Other DBs
NCBI-ProteinID:
AFZ12280
UniProt:
K9VYN6
LinkDB
All DBs
Position
complement(1569605..1571758)
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AA seq
717 aa
AA seq
DB search
MVELDKSISFDGRDIRLKVGLLAPQAGGSVLIQSGDTAVLVTATRSTGREGIDFLPLLVD
YEERLYAAGRIPGGFLRREGRPPEKVTLTSRLIDRPLRPLFPSWLRDDIQVVASTLSMDE
LVPPDVLAVTGASIAVMLAKIPFNGPMAAVRVGLVGDDFVINPTYKEIEAGDLDLVVAGS
PEGVIMVEAGANQLPEQDIIEAIDFGYEAVRDLIAAQQELLAELGIEMVVEQPPEVDTTV
ENFIRDRATEPIKVILAKCEADKNVRDAALDEIKESLKTELSELPEEDPIRVAAAANSKI
LGNTFKDLTKKLMRRQIIEDGIRVDGRKLDEVRPVSCRVGLLPRRVHGSGLFNRGQTQVL
SACTLGTPGDAQALADDLHPEDSKRYLHHYNFPPFSVGETKPMRAPGRREIGHGALAERA
LVPVLPPKEAFPYVIRVVSEVLSSNGSTSMGSVCGSTLSLMDAGVPITKPVSGAAMGLIK
EADEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKINGLSMDIIAKAIDQARPAR
LHILEKMLAAIDQPRTELSAFAPRLLTMSIDPDMIGLVIGPGGKTIKGITEETGAKVDID
DDGTITVSAVDAEKAKRAINIIQGMTRRLHEGDVYAGRVTRIIPIGAFVELLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVVVKVREIDNKGRINLTRLGIHPEQAAAARAAAVSA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggtagaattggataagtctatatcctttgacggacgggatattagactgaaagttggt
ttacttgcgccacaggctggaggctccgttctaattcaatcaggggatacggctgttttg
gtgacagcaacccgttcaacaggcagagaagggatagattttctccctttgttagtagat
tacgaagaaagactgtatgcagcaggtcgcattccagggggtttcttacgtcgtgaaggt
cgtcctcctgaaaaagtaacattaactagccgtttaattgatcgaccattacgcccattg
tttcctagttggttgcgtgatgatatccaggtcgtagcaagtacgctctcaatggatgag
ctagtaccaccagatgtactggctgtaactggagcaagtattgctgtgatgcttgccaag
attccgtttaatggcccaatggcggcagtgcgggttggtttagttggggatgattttgta
attaaccccacctataaagaaattgaagctggagacttagatttagtcgtcgcaggttcg
ccagaaggcgtaatcatggtcgaggctggtgctaaccaattgccagagcaagatattatt
gaagcaattgatttcggctatgaagcagttagagatttaattgctgcccagcaagaatta
ttggcagaacttgggattgaaatggttgtagaacaaccaccggaagttgatactactgta
gagaattttattcgcgatcgcgctacagaacccatcaaagttatcttagccaagtgtgaa
gctgataaaaatgttcgtgatgctgctttagatgaaattaaagaatctctaaaaacagaa
ctttctgaattaccagaagaagacccaattcgagttgcagcagcagcaaatagcaaaatt
ttgggcaataccttcaaagatttgaccaaaaaactcatgcgccgtcaaatcattgaagac
ggtatcagagtagacgggcgcaaacttgatgaagtcagacccgtatcgtgtcgcgtcggt
cttttaccaaggcgtgttcacggtagcggtttatttaaccgaggacaaacccaagttctc
tctgcttgtactcttggaactcctggtgatgcccaagcattagcagatgatttacaccca
gaagacagcaaacgctatctgcatcactacaacttcccaccattctctgttggcgaaacc
aaacccatgcgtgcgccaggtcgtcgtgaaattggtcatggtgccttagcagaaagagcg
ttagtacctgtactaccaccaaaagaagctttcccttatgtcattcgggtagtttctgaa
gtactttcttccaacggttcaacctcaatgggttccgtttgtggttctaccctatctttg
atggatgctggtgtcccaattaccaaaccagttagtggtgcggcaatgggtctaattaaa
gaagccgacgaagttcgcattcttaccgatattcaaggtattgaagacttcttgggtgat
atggacttcaaagttgctggtactgatacaggcatcacagctttgcagatggacatgaag
atcaacgggctatctatggatatcatagctaaagccattgatcaagctagaccagcaaga
ctgcacatcttagagaaaatgttggcagcaattgaccaacctcgcactgaactgtcagcc
tttgcgcctcgtctgttgacaatgagcattgatccagacatgatcggtttagtcattgga
cctggtggtaagaccattaaaggtattactgaagaaacaggtgctaaggttgatattgac
gacgacggcactatcacagtttcagccgtagatgctgaaaaagccaaacgggcaatcaat
attattcagggaatgactcgcagactgcatgaaggagatgtttatgcaggtcgggttact
cggataattcctattggtgcttttgtggaattgcttcctggtaaagaaggcatgattcac
atttctcaacttgctgattaccgtgttggtaaggtagaggatgaggtagctgttggcgat
gaggtcgtggttaaagtgcgtgagattgacaataaaggtcggattaatctcacacgctta
ggaattcaccctgaacaagctgctgctgcccgtgccgccgccgttagcgcatag
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