KEGG   Canis familiaris (dog): 480907Help
Entry
480907            CDS       T01007                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6 isoform X6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
cfa  Canis familiaris (dog)
Pathway
cfa05034  Alcoholism
cfa05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09160 Human Diseases
  09161 Cancers: Overview
   05203 Viral carcinogenesis
    480907 (HDAC6)
  09165 Substance dependence
   05034 Alcoholism
    480907 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cfa01009]
    480907 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    480907 (HDAC6)
   04131 Membrane trafficking [BR:cfa04131]
    480907 (HDAC6)
   03036 Chromosome and associated proteins [BR:cfa03036]
    480907 (HDAC6)
Enzymes [BR:cfa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     480907 (HDAC6)
Protein phosphatases and associated proteins [BR:cfa01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     480907 (HDAC6)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     480907 (HDAC6)
Membrane trafficking [BR:cfa04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    480907 (HDAC6)
Chromosome and associated proteins [BR:cfa03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     480907 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Motif
Other DBs
NCBI-GeneID: 480907
NCBI-ProteinID: XP_005641382
Ensembl: ENSCAFG00000015620
VGNC: 50630
LinkDB All DBs
Position
X
AA seq 1148 aa AA seqDB search
MTSTGQDSTTTRQRRSRHNPHSPPHDSSVTSKRGVKKGALRHSSPSLAEVKKKGRMKKLS
QAAEQDLIVGLQGLDLNLEAKTLCGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QDGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPVW
IRTNSYTCACLASGSVLRLVDAVLRNEIRNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAA
RYAQQKHNIERVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTI
GFGQGQGYTINVPWNQVGMRDADYIAAFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGE
MATTPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPILESPSA
PCPSAQASLFCALEALEPFWEVLVRSAEALEEDILEEEKAEKEEERPWQPSVLPVLTWPM
LQARTGLVYDPAMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAEL
LTCHSAEYVGRLRATEKMKTRELHREGSNFDSIYICPSTFACAQLATGSVCRLVEAVLAR
EVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGT
QHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGPRVGDADYL
AAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRVVL
ILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRV
MKVEDKEGPSTSELITKKVTQPANPGSAERMTTPEGNILDIDTEKGPSASSVEESTPGQA
KSETAVVEFNQDQSLEATTGETTLYQTIPEAATEGTTPGQTTSEEAVGGAEVIQTSCTDN
QTPPTSPVQGATPQISPSKLIENLRTLELNIEAEKAPESQIPEEEGLLGEAAGGQDVDDS
VLNESCGDHADTDQVVLYAVTPLPWCPHLVAVCPIPESGLDVTQPCQDCGVLQENWVCLS
CYQVYCGRYISAHMLHHHEDSGHPLVLSYVDLSTWCYNCEAYVHHQALLDVKNVAHQNKF
GEDMPHSH
NT seq 3447 nt NT seq  +upstreamnt  +downstreamnt
atgacctccaccggccaggattccaccacaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgcctta
cgccactccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctaatcgtgggcctgcaagggctggatctgaaccttgaggcc
aagacactttgtggcactggcttggtgtttgatgagcaactaaatgaattccactgcctc
tgggatgacagctttcctgagggccctgagcggctccatgccatcaaggaacaactgatc
caggatggcctcctggaccgctgcgtgtcctttcaggctcggtttgctgaaaaggaggag
ctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaat
gagggagagctccgcatcctagctgacacctatgactcagtttatctgcatccggtatgg
ataagaactaactcctatacttgtgcctgcctggcctcaggctctgtccttaggctggtg
gatgcagtcctgaggaacgagatccggaatggcatggccattgtcaggcctcctggacac
cacgcccagcacagccttatggatgggtattgcatgttcaaccatgtggccgtggctgcc
cgctacgctcaacagaagcataacattgagagggtccttatcgtggattgggatgtacac
catggtcaaggaacacagtttacctttgaccaggaccccagcgtcctctatttctccatc
caccgctatgagcagggtcggttctggccccacctgaaggcctctaactggtccaccata
ggttttggccaaggccagggatataccatcaatgtgccttggaaccaggtggggatgcga
gatgctgactacattgctgctttcctgcgcctccttctgccagtcgcccttgagttccag
ccccagctggtcctggtggccgctggatttgatgccctccaaggggaccccaagggtgag
atggccaccactccggcagggttcgctcagctaacccacctgctcatgggtctggcagga
ggcaagctgatcctatctctggagggcggctacaacctccgcgccctggctgaaggtgtc
agcgcctcactccacacccttctgggagacccttgccccatcctggagtctcccagtgcc
ccctgcccaagtgcccaggcgtcactcttctgcgccctggaagccctggagcccttctgg
gaggtccttgtgagatcagctgaggccctggaggaggacatcctggaggaggaaaaggcg
gagaaggaagaggagagaccgtggcagccctcagtgctcccagttctgacgtggcccatg
ctgcaagctcgcacagggctggtctatgacccagcgatgatgggtcactacaacttgtgg
gacaaccatcacccagagatgcctcagcgagtctttcggatcatgcgccgtttggaagag
ctgggccttgcggggcgctgccttaccttgcccacacgtcctgccacggacgctgagctg
cttacctgccacagtgccgagtatgtgggccgtctgcgggcaaccgagaagatgaaaacc
cgggagctgcaccgcgagggctccaactttgactccatctacatctgccccagcaccttt
gcctgtgcgcaactggccactggctctgtgtgccgcctggtggaggctgtactagccaga
gaggttttgaatggtactgctgtggtgcgtcccccaggacaccacgcagagcgggatgcc
gcttgtggtttctgctttttcaactctgtggctgtggctgctcgccatgcccaagccatc
agtgggcatgcactgcggatcctgatagtggactgggatgtccatcatggtaatggaact
cagcacatatttgaggaagaccccagtgtgctctacatttccctgcatcggtatgatcat
ggcaccttctttcccatgggggatgagggtgccagcagccaggtaggccaggccgcaggc
actggcttcactgtcaacgtggcctggaatgggccccgcgtgggtgacgccgactacctg
gctgcctggcatcgtctggtgcttcctattgcctatgagtttaacccggaactggtgctg
gtctcagctggctttgacgctgcacggggggacccgctggggggctgccaggtgtcaccg
gagggctatgcccacctcacccacctgctgatgggcctcgccaatggccgtgttgtccta
atcctggagggtggctataacctgacatccatctcagagtccatggctgcctgtacccgt
tccctccttggggacccaccaccactgctaaccctgtcgaggcccccactctcgggggcc
ctggcctccatcaccgagaccatccaagtccatcgcagatactggcgcagcttgcgagtc
atgaaggtcgaagacaaggagggaccctctacttctgagttgatcaccaagaaagtgacc
caaccagccaaccctgggtcagctgagaggatgaccacaccagaagggaacattctggac
atagacacagagaagggtccctcagcatcatccgtggaagagtccactcccgggcaagct
aagtcagagactgctgtggtggagttcaatcaggaccagtccttggaggctaccacaggg
gaaaccactctgtaccagaccatcccagaggcagccacagaaggaaccacaccaggccag
accacctcagaggaagctgtggggggagctgaagtgatccaaacctcatgtactgataac
cagactcccccaacctcacctgtgcaaggagccacaccccagatatcccccagtaagctg
attgagaatctcaggaccttggaactaaacatcgaggctgagaaggcaccagaatctcag
atcccagaagaggaggggctactaggagaggcagctggaggtcaggacgtagatgattct
gtgctgaatgagagctgtggggaccatgctgacactgaccaggtcgtgctttatgccgtg
acaccgctgccctggtgtccccatttggtggcagtgtgccccatccctgagtcaggcctc
gacgtgacccaaccttgtcaggactgtggagtgctccaggagaactgggtgtgtctctct
tgctatcaggtctactgcggtcgttacatcagtgctcatatgctccaccaccacgaagac
tcaggacacccgctggtcctcagctacgtcgacctatccacctggtgttacaactgtgag
gcctatgtccaccaccaggctctcctagatgtgaagaacgtggctcaccagaacaagttt
ggggaggacatgccccactcacactaa

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