Canis lupus familiaris (dog): 609603
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Entry
609603 CDS
T01007
Symbol
SLCO1C1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X2
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
609603 (SLCO1C1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfa02000
]
609603 (SLCO1C1)
Transporters [BR:
cfa02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
609603 (SLCO1C1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
609603
NCBI-ProteinID:
XP_005637136
Ensembl:
ENSCAFG00000012377
VGNC:
46494
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All DBs
Position
27:19902986..19958946
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AA seq
711 aa
AA seq
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MDTSSKENIQLFCKSSVQPVRRPSFKTEYSSSKEKQQCCGELKVFLGALSFVYFAKALAE
GYLKSTITQIERRFDIPSSLVGVIDGSFEIGNLLVITFVSYFGSKLHRPKIIGIGCLIMG
VGTLLIAMPQFFMQRYRYEKYSPFSNSTLSLSPCLLESDSQLPQSIIEKSQSKRNDECEM
DASSSMWVYVFLGNLLRGIGETPIQPLGIAYLDDFASEDNSAFYIGCVQTVAIIGPIFGF
LLGSLCAKLYVDIGFVNLDHVTITPKDSQWVGAWWLGYLIAGIVSLLAAVPFWCLPKSLP
RLRSREDSNSSSEKSKFIMDDHTDYQTPLGEKSKIMEMARDFLPSLRNLFGNPLYLLYLC
ASTVQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVALGIFSGGIIMKKFRIS
VYGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTVSYQGTKPVSYHERALFSDCNSRC
KCSETKWEPVCGENGITYASACLAGCQTSIRSGKTLIFYNCTCVEIAASKSGNSSGMVGR
CQKDNGCPKMFLYFLVISVITSYTLSLGGIPGYMLLLRCIKPQLKSFALGIYTLAIRVLG
IPAPMYFGILIDTSCLKWGFKRCGSRGSCRLYDSNAFRHIYLGLTVMLGTVSIFLSIAVL
FTLKKNCVSKHRSFRTKTEGTMVSARMRKENCTTSDHLLQPNYWPGKETQL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcatccaaagaaaatatccaattattctgcaaaagttcagtgcaacctgtc
aggcgaccttcctttaaaacagaatattcttcctcaaaggagaagcaacagtgctgtggt
gaactgaaggtatttttgggtgccttgtctttcgtttactttgccaaagcattggcagaa
ggctatctgaagagcaccatcactcagatagagagaaggtttgatatcccttcttcactg
gtgggagttattgatggtagttttgaaattgggaatctcttagttataacatttgtaagc
tactttggatccaaacttcacaggccaaaaataatcggaatagggtgcctaatcatggga
gttggaacattgctcattgcaatgccgcagttcttcatgcagaggtacagatacgaaaag
tattctcctttctctaattccactctcagcctctctccatgtcttttggaatcagacagt
caattacctcagtcgattatagaaaaatcacagtctaaaagaaatgatgaatgtgaaatg
gatgccagctcttccatgtgggtttatgttttcctgggtaaccttcttcgtggaattggg
gaaactcctattcagcctctaggcatcgcctaccttgatgattttgccagtgaagacaat
tctgctttctatattgggtgtgtgcagacggttgcaattataggaccaatctttggcttc
ctgctaggctcattatgtgccaaactgtatgttgacattggctttgtaaacctagatcat
gtaaccattactccaaaggattcccaatgggtaggagcctggtggctgggttatctaata
gcaggaattgtaagtcttcttgcagctgtgcctttctggtgtttaccaaagagtctacca
agactccgaagtagagaggattctaattcctcctctgagaaatccaagtttattatggat
gatcatacagactaccaaacaccccttggagaaaagtcaaaaataatggaaatggcaaga
gattttcttccatcattaaggaatctttttggaaatccactgtacttactatatttgtgt
gctagcactgttcagttcaattctttgtttggaatggtgacctataaacctaagtacatc
gagcagcagtacgggcagtcatcctctaaggccaactttgttatcgggctcatcaacata
cctgcggtggcccttggaatattctctggggggataattatgaaaaagttcagaatcagt
gtgtatggagctgcaaaactctacttgggatcatctgttcttgggtacctcctattcctt
tccctgtttgcactgggctgtgaaaattctgatgtggcaggactaactgtctcctaccaa
ggaaccaaacctgtctcttatcatgaacgagctctcttttcagattgcaactcaagatgc
aaatgttcagagacaaaatgggaacctgtgtgtggtgaaaatggaatcacatatgcatca
gcatgtcttgctggctgtcaaacctccatcaggagtggaaaaactcttatattttataat
tgcacctgtgtggagattgcagcctcaaagtcaggaaattcctcaggcatggtgggcagg
tgtcaaaaagataatggatgtcccaaaatgtttctgtatttccttgtcatttcagtcatc
acatcctatactttatctctaggtggcataccgggatacatgctgcttctgaggtgcatt
aagccacaactgaagtcttttgccctgggtatctacaccttagcaataagagttcttgga
atcccagctcccatgtattttggaattttgattgacacttcttgcctcaaatggggattt
aaaagatgtggaagtagaggctcctgcagattgtatgattcaaatgctttcagacacatc
tatctgggactaactgtgatgctgggcacagtgtccattttcctaagtattgcagtactt
ttcactttaaagaaaaattgtgtttcaaaacatagaagcttcagaaccaagacagaagga
acaatggtgtctgcaagaatgaggaaggaaaattgtactacaagtgatcatttgctacaa
cccaactactggccaggcaaggaaacacagctctag
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