Canis lupus familiaris (dog): 611029
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Entry
611029 CDS
T01007
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X2
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
3.6.4.13
]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
611029 (DDX43)
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
611029 (DDX43)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
MOEP19
KH_2
DFP
Motif
Other DBs
NCBI-GeneID:
611029
NCBI-ProteinID:
XP_005627588
Ensembl:
ENSCAFG00000031623
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All DBs
Position
12:35352298..35368549
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AA seq
602 aa
AA seq
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MSRQEAGANASSWVVASRRSSAVSRAPERRPAEDPNRRSREASRGGRGGVWKNSGLQQPV
AAGPREPPLCFGLKNVWVGAVIGRGGSKIKDLQTTTNTKIQIIKAYPEAEVRIFGNKVMQ
AKAKTAIDNLVKKQENYNSKSRIDLPPIKKNFYRQSETTSSMSQEQVDSWRKENNNIMCD
DLKEGEKRRIPNPTCKFEDAFQYYPEVMENFKRAGFQKPTPIQSQAWPIVLQGIDLIGVA
QTGTGKTLSYLMPGFIHLDSQPVIREKRNGPGMLVLTPTRELALQVEAECSKYSYKGLKS
VCIYGGGDRNGQIQDLKKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDMGF
EPQIMKILLDVRPDRQTIMTSATWPYAVRRLAQSYLKAPMIVYVGTLDLVAVSTVKQNII
VTTEEEKRSHIQRFLESISSQDKVIVFVSRKAIADHLSSDLILQHVSVESLHGNREQCDR
ERALENFKTGKVRILIATDLASRGLDVNDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGI
SITLITRNDWRVAGELINILERAHQSVPEELVAMAERYEAHRLRKETERKLGKPQGKPKK
FY
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacaagaagcaggcgccaacgcctcctcatgggtcgttgcttctcggcgaagc
tcggcagtgtcccgggctccagagaggaggccggcggaggacccgaatcgaagaagtagg
gaggccagtaggggcggcaggggcggcgtctggaagaactccggcctccagcagcctgtg
gccgccggtccccgggaaccgccgctctgctttgggttgaagaacgtgtgggtcggcgct
gtgatcggtcgtggggggtccaaaataaaagacctccaaactacaacaaacacgaaaata
cagataataaaagcttatccagaagcagaggtcagaatttttgggaacaaggtgatgcaa
gcaaaggccaaaacagcgatagataatcttgttaaaaaacaagaaaattacaattcgaaa
tccagaattgacttacctccaattaagaaaaacttttataggcaatcagaaacaacaagt
tcaatgtcacaagagcaagtagactcatggaggaaagaaaataataatataatgtgcgat
gacttaaaagaaggcgaaaagcgccgtatacccaatcctacttgtaaatttgaggatgct
tttcaatattatccagaagttatggaaaactttaaaagggcagggtttcaaaaaccaacg
ccaatccagtcacaggcatggccaatagttctacaaggaatagatctcattggagtagct
caaaccggaacggggaagacgttgtcttatttaatgccaggattcatccatcttgactca
cagcctgtaattagagaaaaaaggaacggccccggcatgttagtcctcacacccacgagg
gaattagcgcttcaggtagaagctgaatgttctaagtattcgtataaaggccttaaaagt
gtgtgtatatatggtggtggagatagaaatggacaaatacaagacctgaaaaaaggagta
gatattattattgcaactcctgggaggctgaatgatctacaaatgaataacttcgtcaac
ctcagaagtataacctacttggtattagatgaagctgacaagatgctagatatgggattt
gaaccccagataatgaagattttgttagatgtgcgcccagataggcaaaccattatgaca
agtgcaacctggccatatgctgtccgtcgacttgcacagtcatatttgaaagcaccaatg
attgtatatgttggcactttggatttagttgctgtaagtactgtaaaacagaatataatt
gtcaccacggaagaggagaaacgctctcatatccaacgttttctggaaagcatatcttct
caggacaaagtcatagtgtttgtcagccgaaaagccattgctgaccatttatcaagtgac
ctgattctgcaacatgtatcagtagaatctcttcatggcaatcgagagcagtgtgaccga
gagagagcattagaaaactttaaaacaggtaaagtaagaatattgattgccaccgatttg
gcatcaagaggtctcgacgtcaacgatatcacacatgtctataattacgatttcccccgg
aacatcgaagaatatgtacacagagtggggcgtactggaagagcagggaggacagggata
tctattacgctcatcaccagaaatgactggagagttgctggcgagttaatcaatattctg
gaaagagcacatcagagcgtcccagaggaacttgtggcaatggccgagaggtatgaggca
catagactaagaaaagaaacggaaagaaagttggggaaaccccaaggaaaacccaagaag
ttttattag
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