Citrobacter farmeri: CI104_05165
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Entry
CI104_05165 CDS
T05012
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CI104_05165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfar03019
]
CI104_05165
Enzymes [BR:
cfar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CI104_05165
Messenger RNA biogenesis [BR:
cfar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CI104_05165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AST78519
LinkDB
All DBs
Position
complement(1032558..1033976)
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AA seq
472 aa
AA seq
DB search
MTLPRCTIFTRVANFCRKVLSREESEAEIAVARPRMTVIPREQHAISRKDISENALKVMY
RLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMQDLEDGVIRLIGNPETRYREDPVRMLRAVRFAAKLDMKISPETAEPIPR
LATLLNDIPPARLFEEALKLLQAGYGYETYKKLREYSLFQPLFPTITRYFTENGDSAMER
IIAQVLKNTDNRIHNDMRVNPAFLFAAMFWYPLLEMAQKIAQESGLAYYDAFALAMNEVL
DEACRSLAIPKRLTSLTRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAYDLLALRAEVENN
AELQRLAQWWGEFQVSAPPEQKGMLNELDEDPSPRRRHRRPRKRAPRREGTA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgacactaccgaggtgcactatttttacccgagtcgctaatttttgccgcaaggtgcta
agccgcgaggagagcgaggccgaaattgccgtcgcccgtccgcgtatgacggtcatcccg
cgcgaacagcacgctatttcacgcaaagatatcagtgaaaatgccctgaaggtaatgtac
aggctgaataaagcgggatacgaagcctggctggttggcggtggcgtccgcgaccttctg
ctcggcaaaaaaccgaaagattttgacgtcacaaccaacgcgacgccagaccaggtgcgc
aaactgttccgcaactgccgccttgtaggtcgccgtttccgtctggcgcacgtcatgttt
ggcccggaaattattgaagtcgccacctttcgtggtcatcacgaaggcagcgaaagcgac
cgcactacgtcccagcgcggacaaaacggtatgctgctgcgcgataacattttcggctct
attgaagaagacgcccaacgccgcgatttcaccattaacagcctttattacagcgtcgcg
gattttaccgttcgcgactatgtcggcggcatgcaggatctggaagatggcgtgattcgc
ctgatcggcaatccggaaacccgctaccgcgaagatccggtgcgtatgctgcgcgccgtg
cgtttcgcagcgaagctcgacatgaaaataagcccggaaacggcagagccgatcccgcgc
ctggccacgctgctcaacgatatcccgcccgcgcgcctgtttgaagaggcgttgaagcta
ttgcaggcgggctacggctatgaaacctataaaaagctgcgcgaatacagcctgttccag
ccgctgttcccgaccatcactcgctattttaccgagaatggcgacagcgcaatggaacgc
atcatcgcgcaggtgctgaaaaataccgataaccgcattcataacgatatgcgcgttaac
ccggccttcctgtttgccgcgatgttctggtatccgctgctggaaatggcgcagaaaatc
gcccaggaaagcggtctggcttactacgacgcgttcgcactggcgatgaatgaagtgctg
gatgaggcctgccgttcgctggcgatcccgaaacgcctcacctcgctgacccgcgacatc
tggcaattgcaactgcgcatgtcccgccgtcagggtaagcgcgcgtggaagctgatggag
catccgaaattccgcgccgcgtatgatttactcgccctgcgtgccgaagtggaaaacaat
gccgagctacagcgtctggcgcagtggtggggcgaattccaggtttctgcaccaccagag
cagaaaggtatgctgaacgagctggatgaagatccatcgccgcgtcgccgtcaccgtcgt
ccgcgcaagcgcgcgccgcgtcgtgaaggaacggcatga
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