Citrobacter farmeri: CI104_21685
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Entry
CI104_21685 CDS
T05012
Name
(GenBank) transcriptional regulator LsrR
KO
K11531
lsr operon transcriptional repressor
Organism
cfar
Citrobacter farmeri
Pathway
cfar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CI104_21685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfar03000
]
CI104_21685
Transcription factors [BR:
cfar03000
]
Prokaryotic type
Other transcription factors
Others
CI104_21685
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
HTH_Crp_2
MarR_2
Sigma70_r4
Crp
HTH_24
HTH_37
MarR
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AST82354
LinkDB
All DBs
Position
complement(4375523..4376479)
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AA seq
318 aa
AA seq
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MTINDPMISEQGMSEEELVARIAWFYYHDGMTQSDISNRLGLTRLKVSRLLEKGHQSGII
RVQINSRFEGCLEYETELRRRFDLNNVRVIPGLPGADACVRLGIGAAHMLMESLQPQQIL
AAGFGEATMNTLKRLSGFISAQQIRLVTLSGGVGPYMTGIGQLNAACPVSIIPAPLRASS
AEIARTLKNENSVQDVLLAAQAADAAIVGIGAINQKDEATIIRSGYITKGEQLMIGRKGA
VGDILGYFFDGEGQVIPDMKIHDELIGLTLNTLKTIPTVIGVAGGGNKAEAIAAAMKGGY
INALVTDQETAAAIVSGQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgactattaacgacccgatgatttccgagcaagggatgagtgaagaagagctggtggcg
cgcattgcgtggttctattaccacgacggtatgacgcagagcgacatcagcaacaggctg
gggctgacgcggcttaaggtgtcgcgcctgctggagaaggggcatcagtccgggattatt
cgcgtacagattaattctcgctttgaaggctgtctggaatatgaaactgaattacgtcgt
cgctttgacctgaacaatgtgcgggttatcccgggactccctggagcggatgcctgcgtt
cgcctggggattggcgccgcgcatatgctgatggagtcactccagccgcagcagattctg
gcggcgggcttcggcgaggcgaccatgaataccttaaaacggctgagcgggtttatctct
gctcaacaaattcgcctggtgacgctctccggtggcgtggggccctacatgaccgggatt
ggacaactcaacgcggcctgtccggtcagtattattccggccccgcttcgcgcctcttcc
gcagagattgcccggacgttaaaaaatgaaaacagcgtccaggatgtcctgctggccgcc
caggccgccgatgcggcaattgtcggtatcggcgcaatcaaccagaaagatgaggccacc
attattcgctcaggctatatcactaagggtgagcagttgatgattggtcgcaaaggcgcc
gtgggcgacattctgggctacttctttgatggcgaagggcaggtgattccggatatgaag
atccacgatgaactgatcgggttaaccctcaataccctgaagacgatcccgacggtgatc
ggcgttgccgggggggggaataaagcggaagcgatcgccgcggcgatgaaagggggttat
atcaacgcattggtcactgaccaggaaactgctgccgccattgtcagcgggcagtaa
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