KEGG   Colletotrichum fioriniae: CFIO01_06459Help
Entry
CFIO01_06459      CDS       T04796                                 

Definition
(GenBank) DNA ligase I
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03030  DNA replication
cfj03410  Base excision repair
cfj03420  Nucleotide excision repair
cfj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CFIO01_06459
   03410 Base excision repair
    CFIO01_06459
   03420 Nucleotide excision repair
    CFIO01_06459
   03430 Mismatch repair
    CFIO01_06459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfj03032]
    CFIO01_06459
   03400 DNA repair and recombination proteins [BR:cfj03400]
    CFIO01_06459
Enzymes [BR:cfj01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CFIO01_06459
    6.5.1.6  DNA ligase (ATP or NAD+)
     CFIO01_06459
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CFIO01_06459
DNA replication proteins [BR:cfj03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    CFIO01_06459
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     CFIO01_06459
DNA repair and recombination proteins [BR:cfj03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CFIO01_06459
   NER (nucleotide excision repair)
    Other NER factors
     CFIO01_06459
   MMR (mismatch excision repair)
    Other MMR factors
     CFIO01_06459
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-ProteinID: EXF76535
UniProt: A0A010QIK3
LinkDB All DBs
AA seq 873 aa AA seqDB search
MPSPSKKRKLNDQSSTGVPSRGLEYFFSKQKQNGTLSPKPATESVPEAMPNGTGSADQQP
ELTDEELARKLQAEWDAEVQNERAESTPCPEPAKDPSPRLNETSEGESTETKSGPNGSLA
SSVLPIVTPTTKTLSLSSVANAEDTVSATIPLDQSPLTFDPSAYVPQLKESWAAEGGHAS
YAFLTRCFILVSATQSRIKIVDSLVNCIRVLIEADPESLLPAVWLATNSISPPYISLELG
LGGSAISKALKQVCGLDGRSLKTLYDKHGDAGDVAFEAKKKQSFTLRKPKPLTIKAVYQS
LVKIANSQGQGSGEAKQRIVDRLLQDARGGEESRFIVRTLCQHLRIGAVKTTMLIALSRA
FLLSRPPGAEFPLRSVRDLQKLKKEELAEVWSRPEEILKACFARRPNYNDLVPVLLEIGV
CDELLLRCDLTLHIPLRPMLGSITRDLSEMLTKLQGRDFACEFKYDGQRAQIHCDENGKI
SIFSRHLELMTDKYPDLVALMPKVRGEGVNSFIMEGEVVAVDSETGDLKNFQTLSNRARK
DVAIGSVQVNVCMFAFDLMFLNGQPLLNRPFRERRELLRSMFIEVPRQFTWVQSLDATSQ
DSDTVLEFFKAATDIKCEGIMVKILDNLTDVPYQGDGAVDADGEVAEEPRTPSKSKSRGK
GTKDEEGAAKKKGRRKPLLATYEPDKRLDSWLKVKKDYNSSFETLDMIPVAAWHGQGRKS
KWWSPILMAVRNEDSGALEVVCKCMSGFTDAFYKANREHYDDGELAERQNTRTQKPAFVE
YSGPEPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLKKREDKSMDE
ASTNEFLAGLWRKQEAKAPTKEGQGDVVDEFEE
NT seq 2622 nt NT seq  +upstreamnt  +downstreamnt
atgcccagcccaagtaagaagaggaaactgaacgatcagtcgtcaaccggagtgccttcg
agaggcttggaatactttttttctaagcagaagcagaacggcacgttgtcaccaaaaccc
gcgacggaatctgttcctgaagctatgccaaatggcacgggatcagccgaccagcagccg
gagttgacggatgaggagcttgccaggaagctgcaagcggaatgggatgctgaggtgcag
aatgaaagagcagaatccacgccgtgtcccgaaccagcaaaggacccaagtccacggtta
aatgagaccagtgagggggaatctaccgagacaaagtctggaccgaacgggtcgttggca
tcctcagttctcccaatcgtcacaccgacgacgaagacgctctccctatcctccgtggca
aatgctgaagacacggtctcagcaaccattcctctggatcaaagtccactgacctttgat
ccttccgcatatgtccctcagttgaaggaatcatgggcagccgagggagggcacgcttca
tacgcattcctcaccagatgcttcatcttggtatccgctacacaaagccggatcaagatc
gtggacagtctggtcaattgcattagagtgctgatcgaagctgatccggagagcctactg
cccgcagtctggcttgcaactaactccatctcgcccccttatatctccttggagctcggt
ttgggagggtccgcgatttccaaggcgctgaagcaggtgtgcggattagacggccgctct
ttgaagacactttacgacaagcacggtgatgctggtgatgttgcattcgaggcgaaaaag
aagcaaagctttactctgcggaaacccaaacccttgacgatcaaggcagtctaccagtca
ctggtcaagattgccaacagccaaggccaaggaagcggcgaagcaaagcagaggattgtc
gatcgactcttacaagatgctcgcggtggtgaagagagcaggttcattgtacgaacgttg
tgtcaacatctacgtattggtgctgtcaagaccaccatgttgatcgctctttcaagagct
ttcctcctgtcccgaccccctggggctgagttcccactacgatcagtcagggatcttcaa
aaactaaagaaggaagagctcgctgaagtatggagcaggccagaggaaattctaaaggcc
tgctttgcgcgacggcccaactacaacgaccttgtacccgtcttgttggagattggcgtc
tgcgatgagctactacttcgttgtgatttgacgctacacataccactccggcccatgttg
ggaagcatcacgagagatctttccgagatgctcacgaaactccagggtcgagactttgcc
tgcgagttcaagtacgacggccaaagagctcagattcactgtgatgaaaatggcaaaatt
tccatcttctcaagacacctcgaactcatgacggacaagtaccccgacttggttgcattg
atgcccaaggttcgcggcgaaggcgtcaatagcttcataatggagggcgaagtggtggcc
gtggacagcgagacgggagatttgaagaatttccagacgctgagcaaccgagcgcggaaa
gatgtcgctatcggcagcgtgcaggtcaacgtttgcatgttcgcctttgacctcatgttc
ctcaacggacaacccttactaaaccggccctttcgggaaagaagagagctcctgcggtcc
atgtttatcgaagtcccccgccaattcacctgggttcagagccttgacgctacgtcacaa
gactcggacaccgtattggagtttttcaaggccgcaaccgatatcaagtgcgaaggcatc
atggtcaaaatcttggataacttgactgatgtcccctaccaaggtgacggcgcagtagac
gcggacggcgaggttgccgaagaacccagaacgccttcaaagtcaaaatcacgaggcaaa
ggcaccaaggacgaggagggcgctgcaaagaaaaagggcaggcgcaagcctctcctggct
acatacgagcccgataaacgtctagactcgtggttgaaggtcaagaaggactacaactca
agctttgagacattggacatgatcccggtagccgcatggcacggacaaggccgcaagtcc
aaatggtggtcgccgatcctcatggccgtccgtaacgaggacagcggcgccctcgaagtt
gtgtgtaagtgcatgtcgggcttcaccgacgccttctacaaggcgaacagggaacactac
gacgatggcgagctggccgagaggcagaacacgcgtacccagaagcccgcctttgtcgag
tactctggtcccgagcctgacgtgtggttcgagccacaagaggtgtgggagatggcgttt
gcggatattactctgagcccgacgtacaccgccgccattgggcttgtcagcgacgagcga
ggtctgagcctgcggtttcctcgatttttgaagaagcgggaggacaagagcatggacgag
gcgagtactaatgagttccttgctggtctgtggaggaagcaggaggcgaaggcgccgacg
aaggaagggcagggcgatgttgtggacgaatttgaggagtaa

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