Colletotrichum fioriniae: CFIO01_06898
Help
Entry
CFIO01_06898 CDS
T04796
Name
(GenBank) WD domain-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CFIO01_06898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfj03009
]
CFIO01_06898
Ribosome biogenesis [BR:
cfj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CFIO01_06898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40
ANAPC4_WD40
Cytochrom_D1
Peptidase_S78_2
Motif
Other DBs
NCBI-ProteinID:
EXF85592
UniProt:
A0A010QZA4
LinkDB
All DBs
AA seq
1046 aa
AA seq
DB search
MPHSEQEGPLVKRQKLTVASKPATATRKSSRIFAPFRTVGLVSPTNVPFTSIPLGKMTFQ
ITTSVGRALQTYDLKRGLNLVFVTRPQTPADITTTLAWKDKVFAAWGDARKGEKQGLWAF
KRGKKVEELELPEDLNEPIQQILIFGSWIVGCAVTRLEVWKSATLEHYTTLYTMAGKSGA
NEITGGVTNMPTYLNKIFVGRKDGWVEIWNVSTGKLIYTILPPTPDCGAVTCMQPTTALS
LLAIAYANGNLVIQNILTDKPIIQLKAGHDDEPVTSISFRSDGMGAGHDGRKDGVMATAT
AATGDVTFWDLNNGGRVMGVLRSAHNPPSGDGPLVRGGISKIEFLSGQPVVVTSGRDNAL
KTWIFDETPFSAIPRILHQRSGHAAPVKCLEFLPSDFDGADAGNKWLLSGGQDRSLWGWS
MRRDGQSTELSQGNIRRMAKKTGILSAKAMARGPTTTLEDLKAPEITCIASSLNRDGGIG
ALPGNQPIWQKHRENKKKLDAEVSGSTGWESVVTAHKDDAWARTWFWGRKRAGRWAFPTG
DGSFVSTIAISPCGTFALVGSVEGSIDMYNLQSGIHRQRFPSKLTPAQARALKIQQLKQA
DDVVQLHTEKSSGFAPGTGRHTKAVTGIVVDSMNKNVITCSLDGKIKFWDFVTGNLVHQI
NWAPMAAITGCRYHAANDLMAFTCDDNSVRVVDLETKRTIREFWGCQGTINDFCFSNDGR
WIIAASQDCVVRIWDLPTSHLIDAIRLEKPCTALAMSSSGEYLAATIENELGVAIWTNKS
LFTHVPTRQISDKEAALLTGPTTSGEGNEGLLEAAFTEDGDADAEDETVVAPTVDQLSAE
LTTLSLVPKSRWQTLLHLDLIKQRNKPTEAPKAPEKAPFFLPSVGAGKQPQQQSLIEGAV
APEADAATEAKSRITKLERGRMQEAFTSKLDDGAASGDFDEFITHLKSLSPSTADLELRS
LSPEDGGLLNFIRALTSRLAARRDYELVQAWMTVFLRLHFDLVMADAELLEALGEWKTLQ
AREAGRLDDLVGYCSGVVGFLRSPRT
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgcctcactcggagcaagaagggcctctggtcaagcgacagaagcttactgtcgcctcc
aagcctgccacggccacacgtaaatcctcgcgcatctttgcgcctttccgaactgtcggc
ctcgtctcccccacaaacgtccccttcacttcgattccccttggaaagatgacttttcaa
atcacgacatccgtcggaagagcccttcagacctacgatttaaagagaggtctcaacctg
gtcttcgtcactcgtccccagaccccagccgacatcaccacgacgctcgcatggaaggac
aaggtcttcgccgcatggggcgacgccaggaagggtgagaagcaaggcctctgggcattc
aagcgtggaaagaaggttgaggagctcgagctccccgaagacctcaacgaacctatccag
cagatcctcatcttcggctcctggatcgttggatgcgctgtgacgagactcgaggtttgg
aagtcggccaccctggagcactacaccacactctacaccatggctggcaagtccggcgcc
aacgagatcacgggcggcgtcaccaacatgcccacctacctcaacaagatctttgtcggt
cgcaaggacggttgggtcgaaatctggaacgtcagcaccggcaaactcatctacaccatc
ctccccccgacccccgactgcggtgccgtcacctgcatgcagcccaccacagccttgtca
cttcttgccattgcctatgcaaacggcaacctggtgatccagaacatcctgactgataag
ccaattatccaactcaaggctggccacgacgatgaacccgtcacttccatctctttccga
tccgacggcatgggagcaggccatgatggccgcaaagacggtgtcatggcaaccgcaacc
gccgccacaggagacgtcacgttctgggacctaaacaatggaggcagggtcatgggtgtt
ctgaggagtgcgcacaaccccccgtcaggcgacggtccgttggtacgaggaggaatcagc
aagatcgagttcctgtcaggccagcctgttgttgtcaccagtggacgggacaacgcgctc
aagacgtggatctttgatgagactcccttctccgccatcccgcgtatcttgcaccagcgc
agcggccacgccgcgcccgtcaagtgcttggaattcctcccctccgactttgatggtgcc
gatgcaggcaacaagtggctcctcagtggtggtcaggatcgtagtctttggggatggagt
atgcgacgcgatggccagagcaccgagctcagccaaggaaacattcgcaggatggcaaag
aagactggtattctttctgcaaaggcgatggccaggggccctacgacgactctggaagac
ctcaaggcccccgagattacctgtatcgccagctctctcaaccgcgacggtggtatcggc
gccttgcccggcaaccagcccatatggcagaagcacagagagaacaagaagaagctcgat
gccgaagtcagtggctcgaccgggtgggagagcgtcgtgacggcacacaaggatgacgct
tgggcgcgtacatggttttggggtcgcaagagagccggtcggtgggcattccccacgggc
gacggttcttttgtctctaccatcgccatcagtccctgcggtacttttgctctagtcggt
tccgtagagggcagcatcgatatgtacaacttgcaatccggcattcaccgccagcgcttc
ccgtccaagctcacccctgcccaagcgagagcgctgaagattcagcagctaaagcaggcc
gacgatgttgtgcagcttcacaccgagaagagcagtggctttgcacccggcacgggaagg
cacacgaaggcagtaacgggtattgtggtggactcgatgaacaagaacgtcatcacgtgc
tccctggatggtaagatcaagttctgggatttcgtcacgggcaacctcgtgcaccagatc
aactgggcgccaatggccgccatcaccgggtgccgctaccacgccgcaaacgacctcatg
gccttcacctgcgacgacaactcggtccgcgtcgtcgacctggaaacgaagaggacaatc
agagagttctggggctgtcagggcaccatcaacgacttttgcttctctaacgacggccgc
tggatcatcgccgcttcacaggactgcgtcgtcagaatatgggacctgcctaccagccac
ctcatcgatgccatccgcctcgagaagccctgcactgcgctggccatgtcctcctcgggc
gagtatctcgccgccacgatcgagaacgagctcggcgtcgccatctggaccaacaaatcc
ctcttcacgcacgtcccgacgcggcaaatctcggacaaggaggccgcgctgctcacggga
cccacgacgtccggcgaaggcaacgagggcctgctggaggcggcctttaccgaggacggc
gacgcggacgcggaggacgagaccgtcgtcgcgccgacggtcgatcagctcagcgccgag
ctgacgacgctgtccctggtccccaagagccgctggcagacgctgctccacctggacctg
atcaagcagcgcaacaagccgaccgaggcccccaaggcccccgagaaggcgcccttcttc
ctgccctctgttggcgccggaaagcagccgcagcagcagtcgctcattgaaggcgccgtg
gcacccgaagccgatgccgcgacggaggcaaagtcccgcattaccaagctcgagcgcggt
cgcatgcaggaagcctttacgagcaagctggacgacggcgcggcctcaggagacttcgac
gagttcatcacccacctcaaatccctctccccctcgacggcagacctcgagctccgctcc
ctctcgcccgaggacggcggcctcctcaacttcatccgcgcgctgacgagccgcctcgcg
gcccgccgcgactacgagctggtccaggcctggatgactgtgtttttgcgcctgcacttt
gacctcgtcatggccgacgcggagctgctggaggcgctgggcgagtggaagacgctacag
gcgcgggaggccgggcggctggacgatcttgttgggtactgtagcggtgttgttgggttc
ttgcggagccctaggacgtaa
DBGET
integrated database retrieval system