Colletotrichum fioriniae: CFIO01_12921
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Entry
CFIO01_12921 CDS
T04796
Name
(GenBank) replication factor C
KO
K10756
replication factor C subunit 3/5
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03030
DNA replication
cfj03410
Base excision repair
cfj03420
Nucleotide excision repair
cfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFIO01_12921
03410 Base excision repair
CFIO01_12921
03420 Nucleotide excision repair
CFIO01_12921
03430 Mismatch repair
CFIO01_12921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfj03032
]
CFIO01_12921
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_12921
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_12921
DNA replication proteins [BR:
cfj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CFIO01_12921
DNA Replication Termination Factors
ELG1-RFC complex
CFIO01_12921
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CFIO01_12921
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CFIO01_12921
Check point factors
HRAD17(Rad24)-RFC complex
CFIO01_12921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_22
AAA_16
AAA_30
AAA_11
AAA_19
DUF815
AAA_24
AAA_5
RuvB_N
DNA_pol3_delta
AAA_3
AAA_28
AAA_14
Mg_chelatase
PhoH
AAA_18
Sigma54_activat
SLFN-g3_helicase
DEAD
AAA_7
ATPase_2
ResIII
TniB
bpMoxR
AAA_25
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
EXF85375
UniProt:
A0A010R9L3
LinkDB
All DBs
AA seq
392 aa
AA seq
DB search
MSDFEDEMDVDVPVSKDITFSSDAKQGKRSAANLPVEAEDSLPWVEKYRPVSLNDVSGHQ
DILATINKFVDSNRLPHLLLYGPPGTGKTSTILALARRIYGAENMRQMVLELNASDDRGI
DVVREQIKTFASTKQIFTLGPSSKSGSGGSIAAYKLIILDEADAMTNTAQMALRRIMEKY
TVNTRFCIIANYSHKLSPALLSRCTRFRFSPLKERDIRVLVDKVIEEEHVKIIPDATEAL
VKLSKGDMRRALNVLQACHASSTPLQPNDAPKVAEADIVRETISTETIYNCIAAPQPDAV
QEILDVLLSTTDVTSCLTTINTLKVSRGLALADIITALAEQLATLEVKPEIMIKWLDGLA
DIEHRVAGGGSETVQTGAVVGVIRSGAELMSK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcgaagacgagatggacgtcgacgtccccgtgtccaaagacatcaccttc
tcctcagacgccaagcagggcaagcgcagcgccgccaacctccccgtcgaagccgaagat
agtctgccatgggttgaaaagtaccgcccggtaagcctcaacgatgtgtccggacaccag
gatattctcgccaccatcaacaagtttgtcgactcgaatcgtctccctcacctcctcctc
tatgggcccccgggaactggcaagacctcgacgatcctcgccctcgcgcgccgcatctat
ggcgccgagaacatgcggcagatggttctcgagctcaacgcttcagatgatcgcggcatc
gatgtcgttcgcgagcagatcaagacctttgcctcgacaaaacaaatatttaccctcggt
ccctcgtccaaatcgggcagcggtggcagcatagcggcgtacaagctcatcatccttgac
gaggccgatgctatgacgaacacggcgcagatggcgttgcgtcgcatcatggaaaagtac
actgtcaacacgcgcttctgcatcattgcaaactactcgcacaagctttcaccggcactg
ctgtcaagatgcacgaggtttcgattcagtccgctgaaggagcgcgatattagggtcttg
gtggataaggtgattgaggaggagcacgtcaaaatcatccccgacgccacagaagcattg
gtgaagcttagcaagggcgacatgagaagagcactcaatgtgcttcaggcctgtcacgca
tcaagtaccccgttgcaacccaacgacgcacccaaggtggccgaggcagacattgtgagg
gaaactatctccaccgagacgatatacaactgcatcgccgcccctcaacccgacgccgtg
caggagattctggatgtcttgttgagcacaacagacgtgacatcttgcctgactactatc
aacaccctaaaggtgtcacggggtctcgccctggcagatattatcacggctctagcggag
caactggcgacactcgaggtcaagccggaaatcatgatcaagtggctcgacgggctggcg
gatatcgaacaccgtgtggccggcggtggcagcgagacagtgcagacgggagctgtagtg
ggcgtcatcagaagcggagctgaattgatgagcaaatga
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