KEGG   Colletotrichum fioriniae: CFIO01_12921
Entry
CFIO01_12921      CDS       T04796                                 
Name
(GenBank) replication factor C
  KO
K10756  replication factor C subunit 3/5
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03030  DNA replication
cfj03410  Base excision repair
cfj03420  Nucleotide excision repair
cfj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CFIO01_12921
   03410 Base excision repair
    CFIO01_12921
   03420 Nucleotide excision repair
    CFIO01_12921
   03430 Mismatch repair
    CFIO01_12921
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfj03032]
    CFIO01_12921
   03036 Chromosome and associated proteins [BR:cfj03036]
    CFIO01_12921
   03400 DNA repair and recombination proteins [BR:cfj03400]
    CFIO01_12921
DNA replication proteins [BR:cfj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CFIO01_12921
  DNA Replication Termination Factors
   ELG1-RFC complex
    CFIO01_12921
Chromosome and associated proteins [BR:cfj03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CFIO01_12921
DNA repair and recombination proteins [BR:cfj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CFIO01_12921
  Check point factors
   HRAD17(Rad24)-RFC complex
    CFIO01_12921
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_assoc_2 AAA_22 AAA_16 AAA_30 AAA_11 AAA_19 DUF815 AAA_24 AAA_5 RuvB_N DNA_pol3_delta AAA_3 AAA_28 AAA_14 Mg_chelatase PhoH AAA_18 Sigma54_activat SLFN-g3_helicase DEAD AAA_7 ATPase_2 ResIII TniB bpMoxR AAA_25 nSTAND3 RNA_helicase
Other DBs
NCBI-ProteinID: EXF85375
UniProt: A0A010R9L3
LinkDB
AA seq 392 aa
MSDFEDEMDVDVPVSKDITFSSDAKQGKRSAANLPVEAEDSLPWVEKYRPVSLNDVSGHQ
DILATINKFVDSNRLPHLLLYGPPGTGKTSTILALARRIYGAENMRQMVLELNASDDRGI
DVVREQIKTFASTKQIFTLGPSSKSGSGGSIAAYKLIILDEADAMTNTAQMALRRIMEKY
TVNTRFCIIANYSHKLSPALLSRCTRFRFSPLKERDIRVLVDKVIEEEHVKIIPDATEAL
VKLSKGDMRRALNVLQACHASSTPLQPNDAPKVAEADIVRETISTETIYNCIAAPQPDAV
QEILDVLLSTTDVTSCLTTINTLKVSRGLALADIITALAEQLATLEVKPEIMIKWLDGLA
DIEHRVAGGGSETVQTGAVVGVIRSGAELMSK
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgtccgacttcgaagacgagatggacgtcgacgtccccgtgtccaaagacatcaccttc
tcctcagacgccaagcagggcaagcgcagcgccgccaacctccccgtcgaagccgaagat
agtctgccatgggttgaaaagtaccgcccggtaagcctcaacgatgtgtccggacaccag
gatattctcgccaccatcaacaagtttgtcgactcgaatcgtctccctcacctcctcctc
tatgggcccccgggaactggcaagacctcgacgatcctcgccctcgcgcgccgcatctat
ggcgccgagaacatgcggcagatggttctcgagctcaacgcttcagatgatcgcggcatc
gatgtcgttcgcgagcagatcaagacctttgcctcgacaaaacaaatatttaccctcggt
ccctcgtccaaatcgggcagcggtggcagcatagcggcgtacaagctcatcatccttgac
gaggccgatgctatgacgaacacggcgcagatggcgttgcgtcgcatcatggaaaagtac
actgtcaacacgcgcttctgcatcattgcaaactactcgcacaagctttcaccggcactg
ctgtcaagatgcacgaggtttcgattcagtccgctgaaggagcgcgatattagggtcttg
gtggataaggtgattgaggaggagcacgtcaaaatcatccccgacgccacagaagcattg
gtgaagcttagcaagggcgacatgagaagagcactcaatgtgcttcaggcctgtcacgca
tcaagtaccccgttgcaacccaacgacgcacccaaggtggccgaggcagacattgtgagg
gaaactatctccaccgagacgatatacaactgcatcgccgcccctcaacccgacgccgtg
caggagattctggatgtcttgttgagcacaacagacgtgacatcttgcctgactactatc
aacaccctaaaggtgtcacggggtctcgccctggcagatattatcacggctctagcggag
caactggcgacactcgaggtcaagccggaaatcatgatcaagtggctcgacgggctggcg
gatatcgaacaccgtgtggccggcggtggcagcgagacagtgcagacgggagctgtagtg
ggcgtcatcagaagcggagctgaattgatgagcaaatga

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