Camponotus floridanus (Florida carpenter ant): 112637043
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Entry
112637043 CDS
T03919
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112637043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfo03400
]
112637043
Enzymes [BR:
cfo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
112637043
DNA repair and recombination proteins [BR:
cfo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112637043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
DNA_ligase_A_C
BRCT
BRCT_2
RNA_ligase
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
112637043
NCBI-ProteinID:
XP_025263467
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MATLDAKIEFKQLCDILENVTKAQGVKKKAQILQTFIDFCRNIGNKLKTEYPELDVSLYP
ILRLILVDLERERGPHNLKQASLAKLYANVYGFMKNSDNYKKLANYREPASGKFIGSDFA
ERAYCILDKRLPKTSTGFTIARINIFLDDISKKNVTMQEKIETFRVLFRQITGFEMKWIT
RIVLKDLRLGIGTKRILEIYHQDANEKFLVTNDLREICNQLHDPKTKIKCGIQIFSHFKP
MLLERCDIKNIEKLFRDNDLYYVQTKYDGERSQLHMKDGKFKYFTRRGYDITKNSGYGET
GSSGFLTGVFTRRLNPNCHSFILDGELMGWHKEKGIFCTKGMNFDVKNLSANSHHQPCFV
AFDIILHNNILLVDEPYKNRVKLLNDIFTEEEGSLIVCRSSLISNREELIEAFNERLRDN
EEGLVIKKHDMKYKPNVRDGGGCYKIKAEYSDNLVQDIDLIILGGYYGEGKYTGIIKSFM
VGVAASTSNKEGNPSRFLAVVSVSSGIGDQMLRDLQTKFASHWIKERPENVTGPKKEQPD
VWIRPENSIILKIRATEMIRSNEYPIGYSLRFPRVVDIRMDKPWYSPCTSSELLLLVKNK
GMIQKLTKREATLHDVDEAPVAKLQKTVSRNKSIEYNVYNGQIVLLTRLLDGKEICVING
TDELAKEQIEEILQQHSARIVQNPMNTTFCVIVGNNRTIRGKEVVDSGKYDVVTLDWFKR
VTNQSNWASLGDFLPWELLCSRDKTKHRLTENYDEYYDNFIVDADEETLRRSFDKIGKPL
ADQFTVEQGKNLDKELFNENASPYSLFRDIIGFFENQSCCAKFKFRFMSGMIKDNIDNFV
THIFVEDNETDTVRNLKVDDLTSVKIVKCKWIEECFRSGQLCDITNYLIDY
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggccactttagatgctaaaattgaatttaaacaattgtgtgacattttggaaaatgtt
accaaagcacaaggagtaaaaaagaaagcgcaaatcttgcaaacttttatcgacttttgt
cgaaatattggcaacaaattgaaaactgaatatcctgaattggatgtttcgctatatcca
atattaagattaatattagtcgatcttgaacgagagcgtggaccacataatctgaaacaa
gcttcattagcaaaactttacgctaatgtatatggttttatgaaaaacagcgacaattat
aaaaaactggcaaattatcgagaacctgcatcaggtaaatttatagggagtgatttcgct
gaacgagcttattgcatattagataaaagattacccaaaacaagtactggcttcacgatt
gcgcggataaatatattccttgatgacatatcgaagaaaaatgtgacaatgcaagaaaaa
attgaaacatttagagtacttttccgacaaatcacgggattcgaaatgaaatggataaca
cgaattgtacttaaggatctacgacttggcatagggacaaaaaggatattggaaatttat
catcaagatgcgaatgaaaagtttctcgtgacaaatgatttgcgggagatatgtaaccag
ttgcatgatcctaagacgaaaataaaatgcggtatacaaatattttcgcatttcaaaccg
atgctcctagagaggtgtgacattaagaatatcgaaaagctatttcgagataatgacttg
tattatgtacaaactaagtatgatggcgagagatcgcaacttcatatgaaagatggaaaa
ttcaaatattttacgcgtagaggatacgatattacgaaaaattctggatacggagaaacc
ggatcttcaggttttttgaccggtgtatttacgaggcgcttaaatccgaattgtcattct
tttatattggatggagaattaatgggttggcataaagagaaaggaatattttgcacgaaa
ggtatgaattttgacgtcaagaatttgtcggcgaatagtcatcatcaaccgtgtttcgtc
gcattcgatattattctacataataacattttacttgttgacgagccttataaaaatcga
gtaaaacttctcaatgatatatttaccgaggaagaaggttctttaattgtatgtcgatct
tctttaatttcgaatagggaggaattgatagaggcatttaacgaacgcctccgtgataac
gaagaagggctcgttataaagaaacatgatatgaaatataagccaaatgtccgagatgga
ggcggttgttataagattaaagcagagtattctgacaatttggtacaagatatagacctg
attatactcggcggttactacggagagggcaaatatactggaataattaaaagctttatg
gtgggcgttgccgcttcaacaagtaataaagaaggaaatccatcgcggtttctcgctgta
gtatccgtaagcagtggcataggggatcaaatgttgcgtgatcttcaaacaaaatttgca
tcacattggattaaagaacgccctgaaaatgttacaggccctaaaaaggaacagccggat
gtgtggattcggccggaaaattctataatcttgaagatacgagcgaccgaaatgatacgc
agtaatgaatatccgattggatacagtttgcgatttcctagagttgtagacatcagaatg
gataagccatggtatagtccatgtactagttccgaacttttgttattagtcaaaaacaag
ggaatgatccaaaaattaaccaagcgggaagctactttgcacgatgtagacgaagcacca
gtagctaaattacaaaagacagtaagtcgaaataaatcaattgagtataatgtatacaac
ggacaaatagtactgcttacgcgactattggatggaaaggaaatttgtgtaataaatggt
accgatgaattggcaaaggagcaaattgaagaaatattgcagcagcatagcgcaagaatt
gttcagaatccaatgaatacaactttttgcgtgatagtaggtaataacagaacgatacga
gggaaggaagtagtagatagtgggaaatacgacgttgtaactttggattggtttaaacgc
gttaccaatcaatccaattgggcctcgttaggtgactttttgccgtgggaattattatgt
agccgagacaaaactaaacatcgactcacggaaaactacgacgaatattatgataatttt
attgttgacgcggatgaagagactttgaggcgttctttcgacaagattgggaaaccgctt
gcggatcagtttaccgttgagcagggaaaaaacctggataaggaattgttcaacgagaat
gcgtcaccttattcactgtttagagatataattggattcttcgaaaaccaatcgtgctgt
gctaaatttaaattccgttttatgtcaggtatgattaaggataatatcgataatttcgtt
acacatatctttgtagaagataatgaaacagatactgtgagaaatttgaaagtagatgat
ctaacgtctgtaaaaattgttaaatgtaaatggatcgaggaatgtttccgaagtggtcaa
ttatgcgatattacaaactatctaattgattattag
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