Chitinibacter fontanus: HZU75_12765
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Entry
HZU75_12765 CDS
T06720
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cfon
Chitinibacter fontanus
Pathway
cfon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZU75_12765 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfon03019
]
HZU75_12765 (recQ)
03400 DNA repair and recombination proteins [BR:
cfon03400
]
HZU75_12765 (recQ)
Enzymes [BR:
cfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZU75_12765 (recQ)
Messenger RNA biogenesis [BR:
cfon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HZU75_12765 (recQ)
DNA repair and recombination proteins [BR:
cfon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HZU75_12765 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QLI82324
UniProt:
A0A7D5ZFT6
LinkDB
All DBs
Position
complement(2668197..2670017)
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AA seq
606 aa
AA seq
DB search
MSNPSASHPHSALHYLEHVFGYRAFRGMQEQIVNALCAGQDALVLMPTGGGKSLCYQIPA
LVRDGCAIVVSPLIALMQDQVEALLEIGVAAAFLNSTLDADAARDVEQRLLNGKLKLLYV
APERLMTSRFQALLRQAHISLFAIDEAHCVSQWGHDFRPEYLALSVLADDFPAVPRIALT
ATADHATRAEMKQRLRLENAQEFVASFDRPNLRYTIVEKKTARDQLLTFLRREHEGDSGI
VYCLSRKKVEDTAAWLRTKEIKALPYHAGLDASTRAKHQQIFLREEGVVMVATIAFGMGI
NKPDVRFVAHLDLPKSIENYYQETGRAGRDGLPANTWLAYGLNDVMLLAEMIEQGGSPEE
QKHVERRKLDAMLGLVEATECRRTVLLGYFGEQTIPCGNCDNCLNPPQLVEMSQAAQKAL
SCVYRTGNRFGVGHLVDVLRGKVSPKVKEYLHDKISTFGIGKDIDEASWRAVFRQLLAKG
ALQLAPEGHGGLQLTDTARPYLKGEVPLYLRARTEKFSYRGDKGSEFSSEADQALWQALR
KLRKQLADEIEAPAYHVFGDATLKEMVRLRPLDHYELSRISGVGDRKLEKYGDAFLRVLN
ENYLGL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccttctgcatcccacccccattctgccttgcattaccttgagcacgttttt
ggctatcgtgcatttcgtggtatgcaggaacaaatcgttaatgcgctgtgcgcagggcaa
gatgcgctggtcttaatgccaaccggcggcggcaaatcgctgtgttatcaaattccggcc
ctagtacgtgatggctgcgcgattgtggtttccccactcattgccttaatgcaagatcaa
gtcgaggccttgctggaaattggcgtagcggctgcatttttgaattcgaccctcgacgcc
gatgctgcacgggatgtggaacagcgcttgctgaacggcaaactcaaactactgtacgtc
gcgcccgagcgcttaatgacgagccgttttcaagccctgctgcgccaagcgcatatttcg
ttgtttgcaattgacgaagcacattgcgtctcgcaatgggggcatgatttcaggccagaa
tatctggcactctcggtgctggcggatgatttccccgcagtgccccgcattgcactgacc
gccacagccgatcacgcgacgcgtgccgaaatgaagcagcgcttgcgactggaaaacgcg
caggaatttgtcgccagctttgatcgcccaaacctgcgctataccatcgtcgagaaaaaa
accgcccgcgatcaactgctcacctttttgcgccgcgagcatgaaggcgattcgggcatc
gtttactgtttgtcacgtaaaaaagtcgaagacaccgccgcttggttgcgcaccaaggaa
atcaaagcgctgccctatcatgcagggctcgatgccagtacccgcgccaaacaccagcaa
atatttctgcgtgaagaaggcgtggtgatggtagcaaccattgctttcgggatggggatc
aataagcccgacgtacgttttgtcgcgcatctggatttacccaaaagcatcgaaaactac
tatcaggaaaccggccgcgccgggcgcgacgggctacccgcgaatacctggctcgcttac
ggcctgaacgacgtaatgctactggccgaaatgatcgagcaaggcggcagccctgaggag
caaaaacatgtagaacgccgcaagctcgatgcgatgctcggcctcgtagaagccaccgaa
tgccgccgcaccgtgttgctgggctattttggcgagcagaccattccgtgtggcaattgc
gataattgcctcaatccgccgcaattggtcgaaatgagccaagccgcgcaaaaagcgctg
tcgtgcgtctatcgcaccggcaatcgttttggtgttgggcatttggtcgacgtactgcgt
ggcaaagtcagccccaaagttaaagaatacctgcatgataaaatcagcacctttggcatt
ggcaaagacatcgacgaagccagctggcgtgcggtgtttcgccaattgcttgccaaaggc
gcattgcagctcgcgcccgaagggcatggcgggctgcagctgaccgatacggcgcgtccc
tatctgaaaggcgaagtgcccctttatctgcgcgcccgcaccgaaaaattcagctatcgc
ggcgataaaggcagcgaatttagcagcgaggccgatcaggcgctgtggcaagccttgcgc
aaactgcgtaaacagctcgccgacgaaatcgaagcgccggcctaccatgtttttggcgac
gcgacactcaaagaaatggtgcgcctgcgcccactcgatcattacgaactctcgcgcatc
agcggcgtgggtgatcgcaagctagaaaaatacggcgacgcctttttgcgggtattgaac
gagaattaccttgggctttaa
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