Campylobacter fetus subsp. testudinum pet-3: CR44_06230
Help
Entry
CR44_06230 CDS
T03583
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cfp
Campylobacter fetus subsp. testudinum pet-3
Pathway
cfp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CR44_06230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfp03019
]
CR44_06230
03016 Transfer RNA biogenesis [BR:
cfp03016
]
CR44_06230
Enzymes [BR:
cfp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CR44_06230
Messenger RNA biogenesis [BR:
cfp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CR44_06230
Transfer RNA biogenesis [BR:
cfp03016
]
Prokaryotic type
tRNA degradation factors
CR44_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
AJB45816
LinkDB
All DBs
Position
complement(1254441..1256627)
Genome browser
AA seq
728 aa
AA seq
DB search
MQCSIEVNNQIEIFDLDKVAKQAAGAVLMRVKNTVVLAAVAREDTQVEEDFLPLTVQYIE
KQYAAGRIPGGYVKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVMVLSSDPEVD
LQVVSLNAASVALYLSDIPVNSPVCGVRVGHINGKFVINPSNSELKNSALDLYVAGVKDE
LLMIEMRSLPNEQNEIVPVIAIDPMIDPSLNEGFVSRQKMNEFSEDLMIDGIKLATQAIL
KGSNAYEEAFCNYKKEIANLEYKPEIENENVAIYIDEFYKDDVKAAIHQMAKSERASELS
KIAKQIALSEVAQKEGWDEALISNILGKYKKKLVRTGIIKDKKRADGRGLKDVRPISIET
NILPNAHGSCLFTRGQTQALVVTTLGTDNDAQMSEYLTEKNAVADKFMFNYNFPGFSVGE
ASPLKAPGRRELGHGNLAKRALYPSIDLNSPYSLRVVSEILESNGSSSMASVCGGSLSLR
AAGVETIKLVAGVAMGLIFEGDEHAVLTDIMGLEDHDGDMDFKVAGSKDGITALQMDIKL
GGISLDVLKEALYQAKEAREHILNLMVKADEEIIINEDVLPKLELFSVDPSKIVDIIGQA
GKTIKEIIERFEVSIDLDRDKGEVKIAGGERQKVEAAKDYIIQITQKDSRGGGFRNKREH
KNVTPFNIGDEFEGEIKKMAPFGAFISLRDGVDGLLHISKIVSPLKEGDMIKVKVSDIKG
GKISLDLN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgttcaatagaagtaaataatcaaattgaaatttttgatcttgataaggttgcc
aaacaagcagccggcgcagtattaatgcgcgtgaaaaatacagtcgtattagccgcagtt
gctagagaagatactcaagtagaagaggattttttacctcttactgtacagtatatagaa
aaacagtatgccgcaggtaggataccaggaggatatgttaaaagagagactaaaccaggg
gattttgagaccttaacaagccgcattatagatagaagcttaagacctttatttcctaaa
ggatatgcatatccaactcagattgtcgtaatggttttaagtagtgatccagaagtggat
ttgcaagtagtatcgctaaatgctgcgagtgtagctttatatcttagtgatatcccagtt
aatagtccagtttgtggcgttagagtagggcatataaatggtaaatttgttataaatcca
agcaactcagagctaaaaaactctgctcttgatctttacgtagcaggtgtaaaagatgaa
cttcttatgatagaaatgagaagtttgcctaatgagcaaaatgaaattgtaccagttatc
gctatagatcctatgatagatcctagtttaaatgaaggttttgtctcaagacaaaaaatg
aatgaatttagcgaagatcttatgatagatggtataaaattagctacacaagccatacta
aaaggaagcaacgcatatgaagaggcgttttgtaactacaaaaaagagattgcaaattta
gagtataaaccagagatagaaaatgaaaatgttgcgatatatatagatgaattttacaaa
gatgatgtaaaagcggctattcatcaaatggccaaaagcgaaagagctagtgagctttct
aaaatagctaagcaaatagctcttagcgaagttgctcaaaaagagggctgggacgaagct
cttatctcaaatatacttggaaaatataagaaaaagttagttagaacagggatcataaaa
gataaaaaaagagctgatggaagaggtttaaaagatgttagaccgatcagcattgagaca
aatattttaccaaatgcgcacggaagttgtctatttactcgtggtcaaactcaagctctt
gttgtaactactttaggcactgataacgatgctcaaatgagtgaatatttaacagaaaaa
aatgcggttgccgataaatttatgtttaattataatttccctggatttagcgtaggcgag
gcaagtcctttaaaagctcctggacgacgtgagttaggacatggaaatttagcaaaaaga
gctctttatccaagtatagacttaaatagtccatactctttaagagttgttagcgaaatt
ttagaaagtaatggttcaagctctatggctagcgtatgtggaggttctttatcgcttaga
gcagcaggagtagaaactatcaagcttgtagctggagtggcgatgggtcttatatttgaa
ggtgatgaacacgctgttttaacagatattatgggtcttgaagatcacgatggagatatg
gatttcaaagttgcaggttcaaaagatggtatcaccgctcttcagatggatatcaaatta
ggcggaattagtttagacgtattaaaagaagcgttatatcaagcaaaagaagctagggag
catattttaaatttaatggttaaagcagatgaagagataatcataaatgaagatgtttta
ccaaaattagaattatttagcgtagatcctagtaaaatagttgatataatagggcaagct
ggaaaaactataaaagagattatagaaagatttgaagttagcatagatcttgatagagat
aaaggtgaagtaaagatagctggaggagagagacaaaaggtagaagccgctaaagattat
attatacaaattacgcaaaaagacagcagaggcggcggttttaggaacaaaagagagcat
aaaaacgtaactccttttaatataggagatgagtttgagggtgaaatcaaaaaaatggct
ccttttggtgcatttatatctttaagagatggtgttgatggacttttacatatatcaaaa
atagtttcacctttaaaagagggtgatatgataaaggtaaaagtttcagatatcaaaggt
ggaaaaatatcgttagatcttaattaa
DBGET
integrated database retrieval system