Citrobacter freundii complex sp. CFNIH3: C2U38_25510
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Entry
C2U38_25510 CDS
T06381
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Pathway
cfq03420
Nucleotide excision repair
cfq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2U38_25510
03430 Mismatch repair
C2U38_25510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfq03400
]
C2U38_25510
Enzymes [BR:
cfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U38_25510
DNA repair and recombination proteins [BR:
cfq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2U38_25510
MMR (mismatch excision repair)
Other MMR factors
C2U38_25510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUV28622
UniProt:
A0A2I8SD40
LinkDB
All DBs
Position
complement(5073756..5075918)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLTVENNSPYSIMAV
TFTNKAAAEMRHRIGQIMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWFINSQKDEGLRPHHLQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLTDFPGAETIRLEQNYRSTNNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLDELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRATVSRPVSHQRMG
TPMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgataaacagcgtgaagcggtggccgcg
ccacgcagcaacatgctggttttggccggcgcggggagtggtaaaactcgcgtgctggtg
caccgtatcgcctggttactgacggtagagaacaactcgccatactccattatggcggtg
acctttaccaacaaagcggcggcggaaatgcgccaccgtattggccagatcatgggaacc
agccagggcggtatgtgggtgggtacattccacggcctggcgcaccgtctgctgcgcgcg
caccatatggatgcgaacctgccgcaggatttccagatcctcgacagcgaagaccaattg
cgtttgctcaagcgtttgatcaaggcgatgaatcttgatgagaagcagtggccgccgcgt
caggcgatgtggtttatcaatagtcagaaagacgaagggctgcgcccgcaccatctgcag
agctatggcaacccggttgagcaaacctggcaaaaggtgtatcaggcctatcaggaagcg
tgtgaccgcgcggggctggtggatttcgccgagctgttgctgcgcgcccatgaactgtgg
ctcaacaagccgcatatcctgcagcactaccgcgaacgctttaccaatatcctggtggac
gaattccaggataccaacaacattcagtacgcctggatccgcctgctggcgggcgatacc
ggcaaagtgatgatcgttggcgatgatgaccagtcgatctacggctggcgcggggcgcag
gtggaaaacatccagcgcttcctcacggatttcccgggcgcagaaaccattcgcctggag
cagaactaccgctcgaccaacaacatcctcagcgcggccaacgccctgattgaaaacaac
aacgggcgtttgggtaaaaagctgtggaccgatggcgtcgacggcgaaccaatttcactg
tactgcgcgttcaacgaactcgatgaagcgcgttttgtggtcaatcgtatcaaaacctgg
caggacaacggcggtgcgctggaacagtgtgccattctgtatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgttgttacaagccagcatgccgtaccgtatctatggtgggatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcctacctgcgccttatcgctaac
cgtaatgacgacgctgcattcgaacgcgtggtgaatacgccaacccgcgggattggcgat
cgtacattagatgtcgtgcgtcagacctcccgtgaccgccagcttacgttgtggcaggcc
tgtcgtgagctattgcaggaaaaagccctcgcgggtcgcgccgccagcgccttacagcgc
tttatggagctgatcgatgcgctggcgcaggagaccgccgatatgccgctgcacgtgcag
actgaccgggtgattaaagactccggcctgcgcatgatgtacgagcaggaaaaaggcgag
aagggtcagacgcgtatcgaaaacttagacgaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagacttaatgccgctacaggcgttcctgtcacacgccgcgctg
gaagcaggcgaagggcaggcggatacctggcaggatgcggtacaactgatgacgctgcac
tcggcgaaaggtctggagttcccccaggtatttatcgtgggtatggaagaaggcatgttc
cccagccagatgtcgctggacgaaggtgggcgcctcgaagaagagcgccgcctggcttac
gtaggcgtgactcgcgcgatgcaaaagctgacgctgacctacgccgaaacgcgtcgtctg
tacggcaaagaggtttaccaccgtccgtcgcgctttatcggcgaactgccggaagcgtgc
gttgaagaggttcgcctgcgcgccacggttagtcgtccggtgagccatcagcggatgggc
acgccaatggcggaaaatgataccggctacaagctcggccagcgcgtgcgccacgctaag
tttggtgagggcaccatcgtcaatctggaaggaagcggtgagcacagtcgtttgcaggtc
gcgttccaggggcaagggatcaaatggctggtggcagcctacgccagactggaaacggtt
tga
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