KEGG   Camelus ferus (Wild Bactrian camel): 102519149Help
Entry
102519149         CDS       T02979                                 

Gene name
LIG1
Definition
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cfr  Camelus ferus (Wild Bactrian camel)
Pathway
cfr03030  DNA replication
cfr03410  Base excision repair
cfr03420  Nucleotide excision repair
cfr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102519149 (LIG1)
   03410 Base excision repair
    102519149 (LIG1)
   03420 Nucleotide excision repair
    102519149 (LIG1)
   03430 Mismatch repair
    102519149 (LIG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfr03032]
    102519149 (LIG1)
   03400 DNA repair and recombination proteins [BR:cfr03400]
    102519149 (LIG1)
Enzymes [BR:cfr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     102519149 (LIG1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     102519149 (LIG1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     102519149 (LIG1)
DNA replication proteins [BR:cfr03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    102519149 (LIG1)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     102519149 (LIG1)
DNA repair and recombination proteins [BR:cfr03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     102519149 (LIG1)
   NER (nucleotide excision repair)
    Other NER factors
     102519149 (LIG1)
   MMR (mismatch excision repair)
    Other MMR factors
     102519149 (LIG1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Glyco_hydro_92 PucR
Motif
Other DBs
NCBI-GeneID: 102519149
NCBI-ProteinID: XP_014411499
LinkDB All DBs
Position
Un
AA seq 926 aa AA seqDB search
MQRSIMSFFQPKKEGKVKKPEETSNSTRETESPPKAALKERNRMVPEGDSPVKRPGRKVA
RVLGSEGEEEEEAPSPLKGQKPAPDSPQNSPPHPVTLPKSPSLSNTSPAVLSPPAIPKRR
TARKQVPKRTFLEVLEEQSKDRVTEAKKKKEDKELETPSESLTEPEVGKKEEADAKEQPT
MPPRPRETPEAEPLTESVCKPEMATKQGPQEDGQTQPPRPAAKTLSSFFSPRKPAVKKEA
EEEGPGSVRKEAAKGHLDPPSYNPAKNNYHPIEDACWQPGQKVPYLAVARTFEKIEEVSA
RLRMVETLSNLLRSVVALSPPDLLPVLYLSLNRLGPPQQGLELGIGDGILLKAVAQATGR
QLESVRAEATEKGDVGLVAESSRSMQRLMLPPPALTAAGVFAKFRDIAQLAGNASTTKKM
DIIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAMSLPRLVLEFPPAVVDAG
KGKTAEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLAHGLEQLPEHCRLSPGIPLKPML
AHPTRGVGEVLKLFEEAAFTCEYKYDGQRAQIHLLEGGEVRIFSRNQEDNTGRYPDVISR
VPKIKLPSVTSFILDTEAVAWDQEKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIY
LNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDTEQIAEFLEQSVKDSCEGLMV
KTLDTDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYD
EESEELQAICKLGTGFSDEELEEHHQSLQALVLPAPRPYVRADGAVTPDHWLDPSAVWEV
KCADLSLSPIYPAARGLGPTCTVVSARWTARRASPCASRGFCASGRTRSRSRPPPVLRWP
VCTGSKVRFRTSTAQSRTPSRRISTR
NT seq 2781 nt NT seq  +upstreamnt  +downstreamnt
atgcagcgaagtatcatgtcatttttccagcccaagaaagaaggcaaagtgaagaagcca
gaggagacatccaacagcaccagagaaacagagtcccctccaaaggcggctctgaaagag
cggaatagaatggtgcctgagggcgactctccagtgaagaggccggggaggaaggtggcc
cgggtcctgggcagcgagggggaggaggaggaggaagccccctcgcccctcaaaggccag
aagcctgcaccagactctccacagaactcccctccccatcctgtcacacttcccaagagc
ccttccctctccaacacctctccagcagtcctctccccgccggcgatcccaaagcgtcgc
acagcccggaagcaggttcctaaacggacatttctggaagtcctggaagagcagagcaag
gacagggtcacagaagccaagaagaagaaggaggacaaagaactagagaccccatcagaa
agcctcacggagcctgaagtgggcaaaaaggaggaggcagatgcgaaggagcagcccacg
atgccccccagaccccgagagacccccgaagccgagcccctgacagaaagtgtttgcaag
cctgagatggcaacgaagcagggaccacaggaggacggccagacacagcctccccgccca
gctgccaagacactcagcagtttcttctccccccgaaagccggcagtcaaaaaggaagct
gaagaagagggacctggctctgtaagaaaggaggcagccaagggacacctggacccaccc
agctacaacccggccaagaacaactaccatcccattgaagatgcctgctggcagccaggc
cagaaggtcccttacctggccgtggcccggacctttgagaagatcgaggaggtttctgct
cggctccgcatggtggagacactgagcaacttgctgcgctccgtggtggccctgtcacct
ccagacctcctccccgtcctctacctcagcctcaaccgcctggggccgccccagcagggc
ctggagctgggcattggtgacggtatccttctcaaggcagtggctcaggccacaggtcgg
cagctggagtcggtccgggccgaggccacagagaagggcgacgtggggctggtggctgag
agcagccgcagcatgcagagactcatgctgcccccgcctgccctgaccgccgccggtgtc
ttcgccaagttccgggacatcgcccagctggccggcaatgcatccacaaccaagaagatg
gacatcatcaaaggcctctttgttgcctgccgccactcagaagctcggttcatcgccaga
gccctgagtggacgcctgcgcctcggactggcagagcagtcagtgctggccgccctcgcc
caggccatgagcctcccgcgccttgtcttagaattccccccggccgtggtggatgctggg
aagggcaagacagcagaggccagaaagacgtggctggaggagcaaggcatgatcctgaaa
cagacgttctgcgaggtgccagatctggaccggatcgtccctgtgctgctggcacatggc
ctggagcagctgccggagcactgcaggctgagcccagggatccccctgaaaccaatgttg
gcccaccccacccggggcgtcggcgaggtcctgaaactcttcgaggaggcagctttcacc
tgcgagtacaaatacgatggacagagggctcagatccaccttctggaaggtggggaggtg
aggatcttcagcaggaatcaggaggacaacacgggaaggtaccccgacgtcatcagccgc
gtcccaaagattaaactcccatcagtcacatccttcattctggacactgaagccgtggct
tgggaccaggaaaagaagcagatccagccattccaagtgctcaccacccgcaaacgcaag
gaggtggacgcagcggagatccaggtgcaggtgtgtttgtacgccttcgacctcatctac
ctcaatggagagtccctggtacgtgagcccctctcccgacgccgccagctgctccgggag
aacttcgtggagacggagggcgagtttgtcttcgccacctccctggacaccaaggacacg
gagcagatcgctgagttcctggagcagtcagtgaaagactcatgcgaggggctgatggtg
aagaccctggacaccgatgccacctacgagatcgccaagagatcgcacaactggctcaag
ctgaagaaggactaccttgacggcgtgggcgacaccctggacctcgtggtgatcggcgcc
tacctgggccgggggaagcgggccggccggtacgggggcttcttgctggcctcctacgac
gaggagagcgaggagctgcaggccatatgcaagctggggactggcttcagtgacgaagag
ctggaagagcatcaccagagcctccaggccctggtgctgcccgccccacgcccctacgtc
cgggcagacggcgccgtgacccccgaccactggctggaccccagcgccgtgtgggaggtc
aagtgcgccgacctctccctctcccccatctaccccgctgcccggggcctgggccccacc
tgcactgtcgtctccgccaggtggacagcgagaagggcatctccctgcgcttcccgcggt
ttctgcgcgtccgggaggacaagaagccggagcaggccaccaccagtgctcaggtggcct
gtctgtacaggaagcaaagtcagattcagaaccagcacggcgcagagccggactccgagc
cggaggatttctactagatga

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