KEGG   Collimonas fungivorans: CFU_3228
Entry
CFU_3228          CDS       T01583                                 
Symbol
orn
Name
(GenBank) Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
cfu  Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:cfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfu03019]
    CFU_3228 (orn)
   03009 Ribosome biogenesis [BR:cfu03009]
    CFU_3228 (orn)
Messenger RNA biogenesis [BR:cfu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CFU_3228 (orn)
Ribosome biogenesis [BR:cfu03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    CFU_3228 (orn)
SSDB
Motif
Pfam: RNase_T pP_pnuc_1
Other DBs
NCBI-ProteinID: AEK63052
UniProt: G0ACU7
LinkDB
Position
complement(3778374..3778982)
AA seq 202 aa
MSQAADVSTAIAATTAIPAAPVRPNEFNLIWVDMEMTGLNPDSDRIIEVAVVVTDPQLNI
LAEGPVFAIHQADEIMDGMDAWNKGTHGRSGLIEKVKNSTVTESEAELALIEFLKKYVPN
GKSPMCGNTICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGFKKHQKHT
ALADIIESIEELRYYREHFIKE
NT seq 609 nt   +upstreamnt  +downstreamnt
atgtcacaagccgccgacgtatctactgccatcgccgctaccaccgcaattccagcggcg
ccggtgcggcctaacgaattcaacctgatctgggtcgacatggaaatgaccggcctcaat
ccggacagcgaccgcatcattgaagtagcggtggtggtgacagatccgcaactgaacatc
ctggccgaaggcccggtatttgcaatccatcaggcggacgaaatcatggatggcatggat
gcctggaacaagggcacccacggccgctccggcctgatcgaaaaagtgaaaaactcgacc
gtgaccgaaagcgaggccgaactggccctgatcgagttcctgaagaaatacgtgccgaac
ggcaagtctcccatgtgcggcaacaccatttgccaggaccgccgcttcatggcgcgcggc
atgcccaagctggaggcatttttccactaccgcaacctggacgtgtcgaccctgaaggaa
ctgtgccgccgctggaagccggaactggccagcggtttcaagaagcaccagaagcatacc
gcgctggcggacatcatcgaatcgattgaagagctgcgctattaccgcgagcatttcatc
aaggaataa

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