Collimonas fungivorans: CFU_3228
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Entry
CFU_3228 CDS
T01583
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfu03019
]
CFU_3228 (orn)
03009 Ribosome biogenesis [BR:
cfu03009
]
CFU_3228 (orn)
Messenger RNA biogenesis [BR:
cfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFU_3228 (orn)
Ribosome biogenesis [BR:
cfu03009
]
Eukaryotic type
Pre-60S particles
RNases
CFU_3228 (orn)
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AEK63052
UniProt:
G0ACU7
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All DBs
Position
complement(3778374..3778982)
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AA seq
202 aa
AA seq
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MSQAADVSTAIAATTAIPAAPVRPNEFNLIWVDMEMTGLNPDSDRIIEVAVVVTDPQLNI
LAEGPVFAIHQADEIMDGMDAWNKGTHGRSGLIEKVKNSTVTESEAELALIEFLKKYVPN
GKSPMCGNTICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGFKKHQKHT
ALADIIESIEELRYYREHFIKE
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagccgccgacgtatctactgccatcgccgctaccaccgcaattccagcggcg
ccggtgcggcctaacgaattcaacctgatctgggtcgacatggaaatgaccggcctcaat
ccggacagcgaccgcatcattgaagtagcggtggtggtgacagatccgcaactgaacatc
ctggccgaaggcccggtatttgcaatccatcaggcggacgaaatcatggatggcatggat
gcctggaacaagggcacccacggccgctccggcctgatcgaaaaagtgaaaaactcgacc
gtgaccgaaagcgaggccgaactggccctgatcgagttcctgaagaaatacgtgccgaac
ggcaagtctcccatgtgcggcaacaccatttgccaggaccgccgcttcatggcgcgcggc
atgcccaagctggaggcatttttccactaccgcaacctggacgtgtcgaccctgaaggaa
ctgtgccgccgctggaagccggaactggccagcggtttcaagaagcaccagaagcatacc
gcgctggcggacatcatcgaatcgattgaagagctgcgctattaccgcgagcatttcatc
aaggaataa
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