Collimonas fungivorans: CFU_3993
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Entry
CFU_3993 CDS
T01583
Symbol
lcfA
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00061
Fatty acid biosynthesis
cfu00071
Fatty acid degradation
cfu01100
Metabolic pathways
cfu01212
Fatty acid metabolism
cfu02024
Quorum sensing
Module
cfu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CFU_3993 (lcfA)
00071 Fatty acid degradation
CFU_3993 (lcfA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFU_3993 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cfu01004
]
CFU_3993 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfu04147
]
CFU_3993 (lcfA)
Enzymes [BR:
cfu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CFU_3993 (lcfA)
Lipid biosynthesis proteins [BR:
cfu01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
CFU_3993 (lcfA)
Exosome [BR:
cfu04147
]
Exosomal proteins
Exosomal proteins of breast milk
CFU_3993 (lcfA)
Exosomal proteins of breast cancer cells
CFU_3993 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
AMP-binding_C
Ser_hydrolase
Borealin
Abhydrolase_4
PGAP1
Peptidase_S28
DUF1057
Thioesterase
Motif
Other DBs
NCBI-ProteinID:
AEK63816
UniProt:
G0AF89
LinkDB
All DBs
Position
complement(4678094..4680709)
Genome browser
AA seq
871 aa
AA seq
DB search
MTFNADLHRSTLKLPNRLARNGSGVYDSALEMSVLDAGPEYDRGPRSQQPTMVFIHGFGG
RAAYWEYQLEQFQLDYRVIALDLRGHGYSDAPTAAEGASYDVPELVADIAAALDQLEVPQ
RFILVCHSFGGALSAYFLKQFPQRVSALVMIASAARFRLRLAGRIVLRMPPRIFDMVRKL
MPYVGITAARIYPPSHVVYLQNRHALLPWDGSEYLRAIAVPTLVILGHRDILFDEAAYKE
VARLIPGAEELVVPVSAHQVMVERPDAVNRAIQRFLQMQSDPAELAERRARQKAERRAAR
KQLEAERPWLKFYDARTPYRIKIPAAPLPRLLEATARRFGKTTALAYRGGKIDWRELDRQ
ANRFAHGLLDLRIKPGERILLALPNIPSLVIAYFGILKAGAVAVLSDAATPKEILLTRMA
DAGVVMLVTTTNRYDDLRDELQSDRRAAGLRRVIFASMIDHMGWREKLKFATLHHVQEGH
WLPWFRQDKQHRRHERRYLKFKQVLGRGSVAPTELVQDVGDIAVVVYTYGASGTPLPVAL
SHRNLAANALQLRHWLPESRPGDERFLAQQPLSSAYGLTGLLHLGVYLGATLILLPGAEL
EPLLKTVKKMRPTYFPTTPRMVRELAHTPGVRRYGLASIRVCAVSGSPLAQEIREEFEKL
TRGRLVEAYGLTEAAPAVLAMPLAARRIQGVVGVPLPDTEVKVVDLDTDAELPSDTVGEL
WVRGPQLFSGYDHGPAGAAGPGASALNLIARKISKERLYDGWLATGDVASIDEDGFVSII
DRKSNMGIRNGRRVFPRQIEEVLFEHPAVAVAHVKWSPDEEGVQHLLAEVLLHHNMKLSA
DDLLKYASKRLHADALPDSIAVEQKNTTVLF
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaatgccgacctgcaccgcagcacgctgaaactgccgaaccgcctggcgcgc
aacggcagcggagtctatgacagtgcactggaaatgagcgtgctggatgccgggccagaa
tatgatcgcggcccgcgcagccagcaacccacgatggtttttattcacggcttcggcggc
cgcgcggcctactgggaataccagctggaacaattccagctcgactaccgggtgatcgcg
ctcgacctgcgcggccacggctacagcgatgcgccgacagcggccgaaggcgccagctac
gatgtgccggaactggtcgccgacatcgctgccgcgctggatcagctggaagtgccgcag
cgtttcatcctggtgtgccactcgttcggcggtgcgctgtccgcctatttcctgaagcag
tttccgcagcgcgtgtcggcgctggtcatgatcgcctcggcagcgcgtttccgcctgcgc
ctggccggccgcatcgtgctgcgcatgccgccgcgcatattcgatatggtgcgcaaactg
atgccgtacgtcggcatcaccgcggcccgcatttatccgccgtcgcacgtggtttacctg
caaaaccgtcatgccttgctgccgtgggacggcagcgaatacctgcgcgcgatcgcggtg
ccgacgctggtgattctcggccaccgcgatatcctgttcgacgaggccgcctacaaggaa
gtggcgcgcctgatcccgggcgccgaagaactggtggtgccggtatccgcgcaccaggtg
atggtggagcgccccgatgcggtgaatcgcgccatccagcgcttcctgcagatgcagtcc
gatccggcggagctggcggagcggcgggcacggcaaaaagccgagcggcgcgcagcgcgc
aagcagctggaagccgaacgtccgtggctgaaattctacgatgcccgcacgccataccgc
atcaagataccggcagcgcccttgccgcgcttgctggaagcgacggccaggcgcttcggc
aaaaccacggcgctggcttaccgcggcggcaagatcgactggcgcgaactggaccggcaa
gccaatcgttttgcccatggcttgctcgacttgcgcatcaagcccggcgagcggatcctg
ctggccttgccgaacataccgtctctggtgatcgcctatttcggcatcctgaaagcaggt
gcggtggcggtgctaagcgacgccgccacgcccaaggaaatcctgctgacgcgcatggca
gatgcaggcgtcgtgatgctggtgaccaccaccaaccgctacgacgacttgcgcgatgag
ctgcagagcgatcgccgcgcggccggcctgcggcgcgtcatattcgcgtcgatgatcgat
cacatgggctggcgtgaaaaactgaaattcgcgaccttgcatcatgtgcaggaagggcat
tggctgccctggttccggcaagacaagcagcatcgccggcatgagcggcgctacctgaaa
ttcaagcaggtgctgggacgcggttcggtagcgccgactgagctggtgcaggatgtcggc
gacatcgcggtggtggtgtacacctacggcgccagcggcacgccgctgccggtggcgctg
tcgcaccgcaacctggcagcgaacgccttgcaactgcgccactggctgccggaatcacgg
ccgggcgacgaacgtttcctggcgcagcagcccttgtccagcgcctacggcctgaccggc
ttgctgcaccttggcgtgtacctgggcgcgaccctgatcctgttgccgggagctgaactg
gagcccttgctgaagaccgtcaagaagatgcggccgacatatttcccgaccacgccgcgc
atggtgcgtgaactggcgcacacgcccggcgtgcggcgctacggcctggcctcgatccgg
gtctgcgcggtcagcggttcgccgctggcccaggaaatccgcgaagaatttgaaaagctg
acgcgcggccgcctggtcgaagcctatggcctgaccgaggctgcacccgcggtgctggcc
atgccgctggcggcgcgccgcatccagggcgtggtcggcgtgccgttgccggatacggaa
gtgaaagtggtcgacctggatacggatgccgaattgcctagcgacaccgtgggcgagtta
tgggtgcgcgggccgcagctgttctccggctacgatcatggccctgccggcgccgccgga
cccggggcatccgcactgaacctgattgccaggaagataagcaaggaacgtttgtacgac
ggctggctggccaccggcgacgtcgccagcatcgacgaagacggttttgtttccatcatc
gaccgcaagagtaatatgggaatacggaacggtcgacgggtgttcccgcggcagatcgaa
gaagtcttgttcgagcatccggcggtggcagttgcccacgtgaaatggagtccggacgag
gagggtgtccagcatctgctagcagaggttttgttgcatcacaacatgaagctcagcgcc
gatgatttgctcaaatatgcgtcaaaacgcttgcatgcggacgctttgcccgatagcatc
gcggtagaacaaaaaaatacaaccgtgcttttttaa
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