Campylobacter fetus subsp. venerealis 97/608: CFV97608_0918
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Entry
CFV97608_0918 CDS
T03351
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cfx
Campylobacter fetus subsp. venerealis 97/608
Pathway
cfx02020
Two-component system
cfx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cfx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CFV97608_0918 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CFV97608_0918 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfx03021
]
CFV97608_0918 (rpoN)
Transcription machinery [BR:
cfx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFV97608_0918 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
MS_C
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AIR80545
LinkDB
All DBs
Position
906430..907668
Genome browser
AA seq
412 aa
AA seq
DB search
MKLAQKVTQKAKLNQTLRNWLPILQASSDELKDTLEPFIKDNPFAALEITPKKHTKNFYG
DLYKNSISDTIESSSIYKESLYEKLYSQINSPLFPTQKSIEIANLIVECINNEGYFEWDD
HKFIKFEKSEVERIRLRFAYLEPTGVGALDYKESFIFQLDDIDCDDKIYTLVQTIINDFE
NLSRYTKQKYYEDAIKIIKKFKNPPAIEYLEDNSQIIPDIFVFNNDNGIEIKVNDEFYPD
ILIDTEGVDEKNEFVSSRVKEAKDLIDALEMRKSTLYKIGLMIIEYQYDYFLGGDIKPMK
LKDIAGDLGRNPSTISRAIQNKFLSCARGIVPLKNFFAAAASEDISNAAIKDFVKNLIKN
ENHEKPLSDEAILSKIEKEFNIKLVRRTITKYRKALNIASSNERKRLYIINA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagctcaaaaagttactcaaaaagctaagctcaatcagactcttaggaactgg
cttccgatacttcaagcaagcagcgatgagttaaaagatactttggagccttttataaaa
gacaatccgtttgccgctttagaaataactcctaaaaaacacacgaaaaatttttacggc
gatctttataaaaattccataagtgatactatagaatcatctagtatttataaagaaagt
ttgtatgaaaagctatattctcagataaactctcctctttttcctactcaaaaatcaata
gaaattgcaaatttgatagtagaatgtataaacaatgaaggatattttgaatgggatgat
cataaatttattaaatttgaaaaaagtgaagttgagcggataagactaagatttgcatat
cttgagccaaccggagtaggggctttggattataaagagagctttatatttcagcttgac
gatatagactgcgacgataaaatttatactcttgtacaaactatcatcaatgattttgaa
aatttgagcagatatacaaaacaaaaatattatgaagatgctataaagatcattaaaaaa
tttaaaaatccgcccgctatagagtatttagaagataatagtcagattattccagatatt
ttcgtatttaataacgataacggcatagagataaaagtaaatgatgagttttatccagat
attcttatagatacagaaggagtcgatgaaaaaaacgagtttgtctcttcaagagtaaaa
gaagcaaaagatctcatagatgctttagaaatgcgtaaatccacactttataagatagga
ttaatgataatagagtaccaatacgactattttttaggcggagatataaagcctatgaag
ctaaaagatatagcaggagatttaggaagaaatccatctactatcagcagagccatacaa
aataaatttctaagctgtgctcgcggtatagttcctcttaaaaatttctttgccgcagcg
gctagcgaagatatatcaaatgcggccataaaagattttgttaaaaatcttataaaaaac
gaaaatcacgaaaaacctcttagcgatgaagccatactatctaagatagaaaaagagttt
aatatcaagcttgttagaagaacgataacaaaatacagaaaagctctaaatatagctagt
tcaaatgagagaaaacgtctgtatattataaatgcttaa
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