Cupriavidus gilardii: CR3_1725
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Entry
CR3_1725 CDS
T04050
Name
(GenBank) recombinase RecB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cgd
Cupriavidus gilardii
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgd03400
]
CR3_1725
Enzymes [BR:
cgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CR3_1725
DNA repair and recombination proteins [BR:
cgd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CR3_1725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
GvpK
Motif
Other DBs
NCBI-ProteinID:
ALD90950
UniProt:
A0A0M3SVR3
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All DBs
Position
1:complement(2097752..2101603)
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AA seq
1283 aa
AA seq
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MLPDCHGFRRPSLRHFTPLHDNAAFPPGRDFLDNAAAAAWYFLDRCEQHGQSASAAHLVV
PTAAQIPGVRQALDRAARAAGAPRLLPRILTLGHWLLDFPPAMLHGGKVRSHAARLLAVQ
QAIRGQDWLRQAFGAQTEPAAWGLAQTVLTVCDELSARWLEDAAIRDDDAVLADDRADLL
QQALQRTYAHLSERFLGEEARIVLAFWQALSGPDDPLPARRRALQALAQQLTGPVVWLGP
TPPTPIEAAFLRAAADMVPVLEIGYDWSGGAAEGETNEGAANEADRQGRGDAEAATGLPF
DRAGNGDGGNWYGTLLRLWPECRLPADTTALPSLPTLMAPRLPADRPRVRLIGSARFEDE
AAAAADQLVRWLNEGRKQLALVAHDRVVARRARALLARAGAPVRDETGWKLSTTRAAAAL
MRWFDLVVGDGDTAALLDLLKSPFCLPQLPQRGAAIALLERQVRRHGITGGWRRLLQRFP
ATPQAQWSADTLSDTGPHDDEQAAVLAAAQGATAALLRQLAGEAQAWPRGNDARPVGFWL
QRLQATLDALEMRAALTADDAGAQLLDALARLDELPDDEASATATLTLAEFRAMLAALLE
AVAYKEPSEPAAARITILPLNGARMRRFDGVVIVGCDDAQLPSTAAELMFFSNQMRRELG
LEDREARFAQQARDLAEVLLNNDDVVMTWQRFGGRGEPKHVSGWLERLAVHCEAAGAPIG
ASVAPSVHEAIAQAGGMPAPSAPELAPARWTAQSYNMLRRCPYQFFAGRMLGLAGLEAVS
DDLEKRDIGELLHQILLRYHRDVQARDLRDDAARVAHLQAVSREVFDGVMAEDGNAIGYY
RRWLAVLPSYVAWQAAREREGWYWQAGELDAGAELPMRDGQPIRLHGRIDRLDRHRDGRH
AVLDYKTQSAARLKRKARDAQEDCQLPFYGLLRADARAGSWIALEDGRNEPRSASPASRR
EVSLPDFGEAVAWLQQQLTHDALRLREGAPLPAFGDAAACTWCNARGLCRKGFWQSTALP
DAVAAAPRYMHDRPPAQRSAAPGSERTNHPTSHRATIQEDRWHDRARLSARRPRRQRSRI
HARRLRSGAFRGGRGLRRQRQDLAAGGAAAAPAAGRCRAEPDPGHHLHPQGRRGNARAPA
RRAGAAGERHRRPGAGRAGAARPVARRGARRAASRAHAACTRAGQPRPHGHRHLPRLVRY
LAARRAAGLRHRARRRAARGCAADEARGLGTVLARPVGARGGAVPRSLRAAGRCDRRVLG
ACAAGRDVPRAQRMVGDARGRAR
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgctccccgattgccacggattccgccggccaagccttcgccatttcaccccgctacat
gacaacgctgcgtttccgcccggccgcgactttctcgacaatgccgcggccgcggcctgg
tatttcctcgatcgctgcgaacagcacggccagagcgcgtccgccgcgcatctggtggtg
ccgaccgcggcgcagattccgggcgtgcgccaggcgctggaccgcgccgcgcgcgcggcc
ggcgcaccgcgcctgctgccgcgcattctgacgctgggccattggctgctcgatttcccg
ccggcgatgctgcatggcggcaaggtacgcagccacgccgcgcgcctgctcgcagtgcag
caggcgatccgcggccaggactggttgcggcaggccttcggcgcgcagaccgaaccggcg
gcctgggggctggcgcagacggtgctgaccgtctgcgacgagctgtccgcgcgatggctc
gaggatgccgccattcgcgacgatgacgcggtgcttgccgacgatcgcgccgacctgctg
cagcaggcgttgcaacggacctatgcgcatctgtccgagcgcttcctcggcgaggaggcg
cgcatcgtgctggcgttctggcaggcgctgtccggacccgacgatccgctgccggcgcgc
cggcgtgcgttgcaggcgctggcccagcagctgaccggcccggtggtctggctcgggccg
actccgccgacgccgatcgaggccgccttcctgcgcgccgccgccgacatggtgccggtg
ctggagatcggctacgactggagcggcggggcggccgagggcgagaccaacgagggcgcg
gcgaacgaagccgatcggcaaggccgcggcgatgcggaagcggcgaccggtttgcccttc
gatcgcgccggcaatggcgatggcggcaactggtatggcaccttgctccggctatggcct
gagtgccgtctgcccgccgacacgaccgcgctgccctcgctgccgacgctgatggcgccg
cgcctgcccgccgatcgtccgcgcgtgcggctgatcggcagcgcgcgcttcgaggacgag
gccgccgccgcggccgaccagctggtgcgctggctcaacgagggccgcaagcagctggcg
ctggtcgcgcatgaccgcgtggtcgcgcggcgggcgcgcgcactgctggcgcgcgccggc
gcgccggtacgcgacgagaccggctggaagctgtcgaccacgcgcgccgccgccgcgctg
atgcgctggttcgacctggtggtcggcgacggcgataccgcggcgctgctcgatctgctg
aagagcccgttctgcctgccgcaactgccgcagcgcggcgccgcgatcgcgctgctcgag
cggcaggtgcgacgccacggcatcaccggcggatggcgccggctgctgcagcgctttccg
gcgacgccgcaggcgcagtggagcgccgacacgctgtccgataccggcccgcatgacgac
gagcaagcggccgtgctggcagcggcccagggcgccactgccgcgctgctgcggcagttg
gccggcgaggcgcaagcctggccgcgcggcaatgacgcgcggccggtcggcttctggctg
cagcgcctgcaggccacgctcgacgcgctcgagatgcgcgccgcgctgaccgccgacgat
gccggcgcgcaactgctcgacgcgctggcgcggctcgacgaactgcccgacgacgaggcg
agcgcgaccgccacgctgacgctggccgaattccgcgcgatgctcgccgcgctgctcgaa
gcggtggcctacaaggagccgagcgagcccgccgccgcgcgcatcacgatcctgccgctg
aacggcgcgcgcatgcgccgcttcgacggcgtcgtgatcgtcggctgcgacgacgcgcaa
ctgccgtcgaccgcggccgagctgatgttcttctccaaccagatgcgccgcgagctcggc
ctcgaggatcgcgaggcgcgctttgcgcagcaggcgcgcgatctggccgaggtgctgctg
aacaacgacgacgtggtaatgacctggcagcgtttcggcggccgcggcgagccgaagcat
gtgtcgggctggctggaacgattggcggtgcactgcgaagcggccggtgcgccgatcggg
gcgagcgtcgcaccttccgtacacgaggcgatcgcccaggcgggcggcatgcccgcgccc
tcggcgcccgaactggccccggcgcgctggaccgcgcagtcgtacaacatgctgcgccgc
tgcccgtaccagttcttcgccggccgcatgctgggcctggccggcctggaggccgtcagc
gacgatctcgagaagcgcgatatcggcgaactgctgcaccagatcctgctgcgctaccac
cgcgacgtgcaggcgcgggacctgcgcgacgatgcggcgcgcgtcgcgcatctgcaggcc
gtctcgcgcgaggtcttcgacggcgtgatggccgaggacggcaatgcgatcggctactac
cgccgctggctcgcggtactgccgtcatacgtcgcgtggcaggccgcgcgcgagcgcgag
ggctggtactggcaggcgggagagctcgacgccggtgccgagctgccgatgcgcgacggc
cagccgatccggctgcatggccgcatcgaccggctcgatcgccatcgcgacggccgccat
gcggtgctcgactacaagacgcaaagcgccgcgcgcctgaagcgcaaggcgcgcgatgcg
caggaggattgccagttgccgttctacggcctgctgcgcgccgatgcgcgcgcgggcagc
tggatcgcgctggaggacggccgcaacgagccccgcagcgcctcgccggccagccgccgc
gaggtttcgctgccggacttcggcgaggcggtggcctggctgcagcagcagctgacgcac
gacgcgctgcggctgcgcgaaggcgcgccgctgccggcgttcggcgacgcggcggcctgc
acctggtgcaatgcgcgggggttgtgccgcaaggggttctggcagtcgaccgcgttgccg
gacgcggtcgccgcggcgccccgatacatgcatgaccgcccgcccgcgcagcggtcggca
gcgccggggagcgaacggacgaaccatccaacgagccatcgagcaacgatccaggaggac
cgctggcatgaccgtgcacgcctatctgcgcgacggccacgacgtcagcgaagccgaatt
cacgcgcgccgcctgcgatccggcgcgttccgtggtggtcgaggcctgcgccggcagcgg
caagacctggctgctggtggcgcggctgctgcgcctgctgctggccggtgccgagccgag
ccagatcctggccatcaccttcacccgcaaggccgccgaggaaatgcgcgagcgcctgct
cgacgtgctggcgcagctggcgagcggcaccgacgaccaggtgctggccgcgctggagca
gcgcggcctgtcgcccgacgcggcgcgcgccgcgctgcctcgcgcgcgcacgctgcatgc
acgcgtgctggccagccccggccgcatggccatcgacaccttccacggctggttcggtac
cttgctgcgcggcgcgccgctggcctccggcatcgtgcccggcgccgcgctgcgcgagga
tgcgctgcggatgaagcgcgaggcctgggcaccgttctggcgcggcctgtcggcgcccga
ggcggcgccgtaccgcgaagcctacgagcggctggtcgatgcgatcggcgagttctcggc
gcgtgcgctgctggacgcgatgttccacgcgcgcagcgaatggtgggcgatgcgcgaggc
cgcgcccgatga
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