Cricetulus griseus (Chinese hamster): 100754640
Help
Entry
100754640 CDS
T02813
Symbol
Lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100754640 (Lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cge03400
]
100754640 (Lig4)
Enzymes [BR:
cge01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100754640 (Lig4)
DNA repair and recombination proteins [BR:
cge03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
100754640 (Lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
RTT107_BRCT_5
HTH_Tnp_Tc3_2_like
Motif
Other DBs
NCBI-GeneID:
100754640
NCBI-ProteinID:
XP_027243686
UniProt:
A0A9J7F019
LinkDB
All DBs
Position
1
Genome browser
AA seq
912 aa
AA seq
DB search
MATSQTSQTVAAHVPFADLCSTLERIQKSKERAEKIRHFKEFLDSWRKFHDALHKNKKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPSGART
DAGDFAVIAYFVLKPRCLQKGSLTLQQVNELLDLVASNNSGKRKDLVKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTILNIFHNDAVELHNVTTDLEKVCRQLHDPAVGLSDISI
TLFSAFKPMLAAVADVERVEKDMKQQSFYIETKLDGERMQMHKDGSVYQYFSRNGYNYTD
QFGASPQEGTLTPFIHDAFRTDVQVCILDGEMMAYNPTTQTFMQKGVKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGRETLRKRYDILNSTFTPIQGRIEIVQKKLAQTKNEVVDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGSRGGMM
SHFLCAVAEKPPHGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFHKKSPPSSILC
GTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGTTLRFPRIEKIRDDKEWHECMTLGDLE
ELRGKASGKLATKHLHVGDDDEPREKRRKPVSKMKKTIGIIEHLKAPNLSNISKVSNVFE
DVEFCVMSGLDGYPKSDLENRIAEFGGYIVQNPGPDTYCVIAGCENIRVKNIISSDQHDV
VKPEWLLECFKTKTCVPWQPCFMIHMCPSTKQHFAREYDCYGDSYFVDTDLDQLKEVFLG
IKKAGEHQTPEEMAPVIADLEYRYSWDHSPLCMFRHCTVYLDLYAVINDSSSKIKATRLD
VTALELRFHGAKVVSHLSEGVSHVIIGEDQSRVSDFKVFRRTLKKKFKILQERWVTDSVD
KGELQEENQYLL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcacaaacttcacaaactgttgcagctcatgtcccctttgcggatttatgt
tccacattagaacgaatacagaaaagtaaagaacgtgcagaaaagatcaggcactttaag
gaatttttagattcttggagaaaatttcatgatgcccttcataagaacaagaaagatgtt
acagactctttttacccagcaatgagacttattcttcctcagttagaaagagagaggatg
gcttatggaatcaaagaaaccatgcttgctaagctttacattgaattgctgaatttacca
agagaaggcaaggatgccctgaagctcctgaattatcgaacacctagtggagctcgcacg
gatgctggggactttgcagtgatcgcatacttcgttttgaagccaaggtgcttacagaaa
ggaagcttaactctacagcaggtaaatgaactcttagacttagtcgccagcaataattct
ggcaaaagaaaagacctagtgaaaaagagcctccttcagttaataacccagagttcagcc
cttgagcaaaaatggctgattcgtatgattattaaggacttgaagcttggtgtcagtcaa
caaactatacttaacatttttcataatgatgcagttgagttgcacaacgtcaccacagac
ctggaaaaggtctgtaggcagctacacgaccccgctgtagggctcagtgatatctctatc
actctgttttctgcctttaagccaatgcttgctgctgtagcagatgtggaacgcgtggag
aaggacatgaagcagcagagtttctacatcgaaaccaagctggacggggaacgcatgcag
atgcacaaagatgggtcggtgtatcagtacttctccagaaacggctataactacactgat
cagtttggtgcatctccacaggaaggcactctcaccccattcattcatgatgcgttccgg
acagacgtgcaagtatgcatcctcgatggtgagatgatggcctacaacccgaccacacag
actttcatgcaaaagggggtcaaatttgatatcaaaaggatggtggaagattccgaccta
cagacatgttactgtgtttttgatgtgttgatggttaataataagaagctagggcgtgag
actctgagaaagaggtatgatatccttaatagtacttttacacccatccaaggtcgaata
gaaatagtacagaaaaagctagctcagacgaagaacgaagtagtagatgcattaaacgaa
gccatagataagagagaagaaggcatcatgatcaaacaccctctgtccatctacaagcca
gacaaaagaggtgaagggtggctaaaaattaaaccagagtatgtcagtggattaatggat
gaattagacctcctaattgtggggggctactgggggaaaggttcacgaggtggcatgatg
tctcactttttgtgtgcagtggcagagaagccccctcatggtgagaagccatctgtattc
catactctgtgtcgtgttgggtcgggatacaccatgaaagaactctatgatcttggcttg
aaattggccaaatactggaagccctttcataagaaatccccaccgagtagtattttatgt
ggaacagagaagccggaagtctacattgagccctgtaactctgttattgttcagattaag
gcagcagagattgtccccagtgacatgtacaagaccggcaccaccttgcgcttcccacgt
atcgagaagatcagagatgacaaagagtggcatgaatgcatgactctgggtgacttagaa
gagctgagggggaaagcatctgggaaacttgccacaaaacaccttcacgtaggtgacgat
gatgaacctagagaaaagaggcggaaacctgtctccaaaatgaagaaaaccattggaatt
attgaacacttgaaagcgcctaacctttctaacataagcaaagtttccaatgtatttgaa
gatgttgagttttgtgttatgagtgggttggatggttatcccaagtctgacctggagaac
agaattgcagaatttggtggttatatagtgcagaatccaggcccagacacatactgtgtg
attgcaggctgtgagaacataagagtgaaaaacattatctcttcagatcaacatgatgtt
gtcaagcctgagtggcttttagagtgttttaaaacaaaaacgtgtgtgccatggcaaccc
tgctttatgattcacatgtgcccatcaacaaagcagcattttgcccgtgaatatgattgc
tatggcgatagctattttgttgatacagatttggatcaactgaaagaagtgtttttagga
attaagaaagcaggtgagcatcagactccggaagagatggcccctgtgattgctgaccta
gaatatcgttattcttgggaccactctcctctctgtatgtttcgacactgcactgtttat
ctggacctgtatgctgttattaatgactcgagttccaaaatcaaagcaacgaggttagat
gtgacagcacttgagctgcggtttcatggagccaaggtagtgtcccacttatctgagggg
gtatctcatgtaatcatcggggaagatcagagccgagtttcggacttcaaagttttcaga
agaactcttaagaagaagtttaagatccttcaagaacgttgggtgactgattcagtagac
aagggtgaactacaggaggaaaaccagtatttgctttag
DBGET
integrated database retrieval system
