Cricetulus griseus (Chinese hamster): 100754755
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Entry
100754755 CDS
T02813
Symbol
Hmgb1
Name
(RefSeq) high mobility group protein B1 isoform X2
KO
K10802
high mobility group protein B1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03410
Base excision repair
cge04140
Autophagy - animal
cge04217
Necroptosis
cge04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100754755 (Hmgb1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100754755 (Hmgb1)
09143 Cell growth and death
04217 Necroptosis
100754755 (Hmgb1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100754755 (Hmgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cge03036
]
100754755 (Hmgb1)
03400 DNA repair and recombination proteins [BR:
cge03400
]
100754755 (Hmgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cge04147
]
100754755 (Hmgb1)
Chromosome and associated proteins [BR:
cge03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
100754755 (Hmgb1)
DNA repair and recombination proteins [BR:
cge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100754755 (Hmgb1)
MMR (mismatch excision repair)
Other MMR factors
100754755 (Hmgb1)
Exosome [BR:
cge04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100754755 (Hmgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
100754755
NCBI-ProteinID:
XP_027269518
UniProt:
A0A9J7FX08
LinkDB
All DBs
Position
4:complement(84877043..84882617)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg
caaacttgccgagaggaacacaagaagaagcacccggatgcttctgtcaacttctcagag
ttctcgaagaagtgctcagaaaggtggaagaccatgtctgctaaagaaaaggggaaattt
gaggacatggcaaaggctgacaaagctcgttatgaaagagaaatgaaaacctacatcccc
cccaaaggggagaccaaaaagaagttcaaggaccccaatgcacccaagaggcctccttcg
gccttcttcttgttctgttctgagtatcgcccaaaaatcaaaggagaacatccaggcttg
tccattggtgatgttgcaaagaaactgggagagatgtggaacaacactgctgcagatgac
aagcagccctatgaaaagaaggctgccaaactgaaggagaagtatgaaaaggatattgct
gcttacagagctaaaggaaaacccgatgcagcgaaaaagggggtggttaaggcagaaaag
agcaagaaaaagaaggaagaggaagatgatgaggaggatgaagaggatgaggaagaggag
gaagaagaggaagacgaagatgaagaagaagatgatgatgatgaataa
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