KEGG   Cricetulus griseus (Chinese hamster): 100763688Help
Entry
100763688         CDS       T02813                                 

Gene name
Hdac6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge05034  Alcoholism
cge05165  Human papillomavirus infection
cge05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:cge00001]
 09160 Human Diseases
  09161 Cancers
   05203 Viral carcinogenesis
    100763688 (Hdac6)
  09164 Substance dependence
   05034 Alcoholism
    100763688 (Hdac6)
  09167 Infectious diseases
   05165 Human papillomavirus infection
    100763688 (Hdac6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatase and associated proteins [BR:cge01009]
    100763688 (Hdac6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA Biogenesis [BR:cge03019]
    100763688 (Hdac6)
   04131 Membrane trafficking [BR:cge04131]
    100763688 (Hdac6)
   03036 Chromosome and associated proteins [BR:cge03036]
    100763688 (Hdac6)
Enzymes [BR:cge01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100763688 (Hdac6)
Protein phosphatases and associated proteins [BR:cge01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100763688 (Hdac6)
Messenger RNA biogenesis [BR:cge03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100763688 (Hdac6)
Membrane trafficking [BR:cge04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    100763688 (Hdac6)
Chromosome and associated proteins [BR:cge03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     100763688 (Hdac6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-HIT
Motif
Other DBs
NCBI-GeneID: 100763688
NCBI-ProteinID: XP_003505149
LinkDB All DBs
Position
X
AA seq 1135 aa AA seqDB search
MTSTGQDSSTKQRRSRHNPQSPPQDSSATLKRGVKKGTAMHSSPNLAEVKKKGKMKKLSQ
AVEEDLIVGLQGLDLNPETRLSVGTGLVFDEQLNDFHCLWDDSFPECPERLHAIKEQLIL
ESLLDRCVSFQARFAEKEELMSVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSY
SCACLATGSVLRLVDAVLGAEIRNGMAVIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKK
HRIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQ
GYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPA
GFAHLTHFLMGLAGGKVILSLEGGYNLHALAKGVSASLHTLLGDPCPMLESPGAPCASAQ
TSISCTLEALEPFWEILVKSVEPQEEDEVEEDRVEEEYEEDRWEAAGLPMDTWPVLQDRT
GLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLTARCLILPVRPAMDAELLACHS
AEYVDRVRATEKMKTRELHREGANFDSIYICPSTFACAQLATGAACCLVEAVLSGQVLNG
IAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQAIAGRALRILIVDWDVHHGNGTQHMFE
DDPSVLYVSVHRYDHGTFFPMGDEGASSQVGRAAGIGFTVNVPWNGPRMGDADYLTAWHR
LVLPIAYEFNPELVLVSAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLANGRIILILEGG
YNLASISESMAACTHSLLGDPPPQLTLLRPPQPGALASITETIQVHRRYWRSLRMMKMED
KEECSSSKPKMTNPVSPMGVTTPKEAVSAKESTLGNAKSETAKAVLAQDQYSEQAAREAT
LDQKTSNEPVGGSTTDQHASASATKNVPNQTTSEEAVGETEPIQIPVASCADKQTTEASP
IQGATAQQAPDQLTGRLSTLTLRTGPLEAPESEEGLLAEAAGGQDMNSLMLTQGFGNFNA
QDVFYAVTPLSWCPHLVAVCPIPATGLDTSQPCETCGTLQENWVCLTCYQVYCSRYVNAH
MVHHHEASEHPLVLSCVDLSTWCYLCQAYVHHQDLQDVKSAAHRNKFGEDMPHSH
NT seq 3408 nt NT seq  +upstreamnt  +downstreamnt
atgacctccaccggccaagattcttctaccaaacaacgaaggagtaggcacaatcctcag
tcgcccccccaggactccagcgccaccttgaaacggggtgttaagaagggtactgcgatg
cactccagccccaatctagcagaggtaaagaagaaaggcaaaatgaagaagctcagccaa
gctgttgaagaagacctgatcgtggggcttcaagggctggatctgaaccctgagacaaga
ttatcggttggtactggattggtgtttgatgaacaactaaatgacttccactgcctttgg
gatgacagcttccctgaatgccctgagcggctccatgccatcaaagagcagctgatcctg
gagagcctgctggaccgttgtgtgtcctttcaggcccggtttgctgagaaggaggagctg
atgtcggttcacagcctggaatacattgacctgatggaaacaacgcagtacatgaatgaa
ggagaactccgcatactagcagatacctatgactcagtttatctgcatccgaactcatat
tcatgtgcctgcctggccacaggctctgtcctgaggctggtagatgcggtcctgggggct
gagattcggaatggcatggctgtcatcaggcctccaggacaccatgcccagcacagtctt
atggatgggtattgcatgttcaaccacgtggctgtggctgcccgctatgctcaaaagaag
caccgcattcagagggttcttatcgtggactgggatgtgcaccatggtcaaggaacacag
ttcatcttcgaccaggaccccagtgtcctctatttctccatccaccgctatgagcagggt
cggttctggccccaccttaaggcttctaactggtccactacaggttttggccaaggccag
ggatatactatcaatgtaccttggaaccaggtggggatgcgggatgctgactacattgct
gcttttctgcacatcctgctgccagttgcctttgagtttcagcctcaactggtcctggtg
gctgctggatttgatgccctccaaggagaccccaagggagagatggccgccactccagca
ggctttgcccacctaacccatttcctcatgggtctggcaggaggcaaggtgattttgtct
ctggagggtggctataacctccatgccctggctaagggtgtcagtgcatcactccacacc
cttcttggagacccttgccccatgctggagtcccctggtgcaccttgtgcaagtgcccag
acttcaatctcctgcacgctagaagcccttgaacccttctgggagatccttgtgaaatca
gtcgagccccaggaggaagatgaagtagaggaagacagggtggaagaagaatatgaggaa
gatcgctgggaggctgctggactgccaatggatacatggccagtgctacaggatcgcact
gggctggtctatgatgaaaagatgatgagtcactgcaacctatgggacaatcatcaccct
gagacacctcagcgcatcttacggatcatgtgccacctggaggaggtgggcctcacagca
cgctgcctcatcctacctgtgcggcctgccatggatgctgagcttcttgcttgccacagt
gccgagtacgtggatcgtgttcgggccacagaaaagatgaaaacccgggagctacaccgt
gaaggtgccaactttgactccatctacatctgccccagcacctttgcctgtgcgcagctt
gccacaggggctgcctgctgcctcgtggaagctgtgctttcaggacaggtgttgaatggc
attgcaatagtgcgtcctccaggacaccacgcagaaccagatgctgcttgtggtttctgc
tttttcaactctgtagctgtggctgctcgacatgctcaagccattgctgggcgtgccctg
cggatcctgatcgtggactgggatgttcatcatggtaatggaactcagcacatgtttgaa
gatgaccccagtgtattatatgtgtccgtgcaccggtatgaccatggcactttcttcccc
atgggggatgagggtgccagtagccaagtaggccgagctgccggtataggcttcactgtc
aatgtgccctggaatgggccccgcatgggtgatgctgactacctgactgcctggcatcgt
ctggtacttcccatcgcctatgagtttaacccggaactggtactggtttcagctggtttt
gatgctgcacaaggggacccactggggggctgccaagtgacacctgagggttatgcccac
cttactcacctgctgatgggccttgccaatggccgcattatccttatcctagagggtggc
tacaacttggcatctatctctgaatctatggctgcctgtacccattccctccttggagac
ccaccaccccagcttaccttgctgcgacctccacagccaggagccctggcctcaattact
gagaccatccaagtccatcgcagatactggcgcagtttgcggatgatgaagatggaagac
aaggaagaatgctccagttctaagcccaaaatgaccaatcctgtgtcacctatgggagtg
accacaccaaaagaagcagtatctgcaaaagaatctactctgggcaatgctaaatcagag
acagctaaggcggtgcttgctcaggaccagtactcagaacaagctgctagggaagctaca
ctggaccagaaaacctcaaatgagcctgtgggaggaagtactacggaccagcatgcctca
gcatcagccacaaaaaatgtacctaaccagaccacctcagaggaggctgtgggagaaact
gagccaatccaaattcctgtagcctcatgcgcagacaagcaaaccacagaagcttcccct
atacagggagccacagcccagcaggcccctgaccagctgactggaagactcagcactttg
acactacgaactggacctctggaggcccctgaatctgaggagggcctactagcagaagca
gctggaggtcaggacatgaatagcttgatgctgacgcaaggatttgggaactttaatgcc
caggatgtattttatgctgtgaccccactatcctggtgtccccatttggtggcagtatgc
cccattcctgcaacaggcctggatacatctcaaccatgtgagacctgtggaacgctgcag
gagaactgggtgtgtctgacttgctatcaggtgtactgcagtcgttatgtcaacgcccat
atggtccaccaccatgaagcctcagaacatccactagtcctcagctgtgttgacctgtct
acctggtgttatctctgtcaggcttatgtccaccaccaggatctccaagatgtgaagagt
gctgcccaccggaacaagtttggggaggacatgccccactcacactaa

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