KEGG   Cricetulus griseus (Chinese hamster): 100765697Help
Entry
100765697         CDS       T02813                                 

Gene name
Setdb1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge00310  Lysine degradation
cge04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:cge00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    100765697 (Setdb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100765697 (Setdb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cge03036]
    100765697 (Setdb1)
Enzymes [BR:cge01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     100765697 (Setdb1)
Chromosome and associated proteins [BR:cge03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     100765697 (Setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100765697 (Setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537 53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID: 100765697
NCBI-ProteinID: XP_003498702
UniProt: A0A2Z6LC65
LinkDB All DBs
Position
1
AA seq 1131 aa AA seqDB search
MAALRKSAQDVQKFMDAVNKKSSSQDLNKGTLGQMSGELSKDGDLIVSMRILGKKRTKTW
HKGTLIAIQTVGLGKKYKVKFDNKGKSLLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQ
VWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDSSCRDFI
EEYITAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGSLVRILFLDDKRCEWIYRGST
RLEPMFSMKTSSASAMEKKQGGQLRTRPNMGAVRSKGPVVQYTQDLTSTGTQFKLTEPPQ
PIATPAPPAALPLSPQAGDTESLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPASPTLSE
SVTAGKLGINQTYRSPLASVASTPTPAAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCS
YTCLSRIRPMRNEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQ
EIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPFKPFYYILDITYGKEDVPLSCVNEIDT
TPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQI
NPNSGYQYKRLEECLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRC
LDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDVASSSD
SSGVDMKDQEDGNSGSEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGL
SEVASKDSRPPDLGPPNVPVPPAVSVGGCKPPSSEETPKNKVASWLSCNSVSEGGFADSD
SRSSFKNSERGDGRAGAGRAEAEKASTSGLSFKDEGDNKQTKKEDPDDRNKMSVVTESSQ
NYGHNPPMKSDGLRRPSSKTSMPQSRRLGASTQSNPDDILTLSSSTESEGESGISRKPTA
GQTSATAVDSDDIQTISSGSDGDDYEDKKNLTGPTKRQVAVKSTRGFALKSTHGIAIKST
NMASVDKGESAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTH
DLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3396 nt NT seq  +upstreamnt  +downstreamnt
atggctgccttaagaaaatcagctcaagatgtccagaagttcatggatgctgtcaacaag
aaaagcagttcccaggatctaaataaaggaaccttgggtcagatgtctggagaactgagc
aaagatggggacctgatagtcagtatgcggattctgggcaagaagaggactaagacatgg
cacaaaggcacccttattgccatccagactgttgggctgggaaagaaatacaaagtgaaa
tttgacaacaaagggaagagtctgctgtctggcaaccacattgcctatgattatcaccct
cctgctgacaagctgtttgtgggcagtcgcgtggtagccaaatacaaagatggaaatcag
gtctggctttatgctggcattgtagctgagactcccaacgtcaagaacaagctcagattt
ctgattttctttgatgatggttatgcctcctatgtcactcagtcagaactgtatcccatt
tgccgaccattgaaaaagacctgggaggacatagaagacagctcctgccgagacttcata
gaggaatatatcactgcctacccaaaccgccccatggtacttctcaagagtggccagctt
attaagactgagtgggaaggcacatggtggaaatctcgagttgaagaggtggatggcagc
ctagtcaggatcctctttctggatgacaagagatgtgagtggatctatcgaggctctaca
cgcctggaacccatgttcagtatgaagacatcatcagcttctgcaatggagaagaagcaa
gggggacaattgagaacccgtcctaatatgggtgctgtgaggagcaaaggtcctgttgtt
cagtatacacaggacctaaccagcactggaacccagttcaagctcacggagcccccacag
cccatagctacaccggccccccctgctgcacttcctctttccccacaagcaggtgacact
gaaagcttagaaagccaacttgctcagtcacggaagcaagtggccaaaaagagcacatcg
tttcggccaggatctgtgggttctggccattcctcccctgcttcgcccacactcagtgaa
agtgtaactgctgggaaacttgggatcaaccagacatacagatcgcctttggcctcagta
gcatctactccaacacctgcagcccctccagccttccatggcatgttagagcgggcacca
gctgagccttcctaccgagcccccatggagaagcttttctatttacctcatgtctgcagt
tacacttgtctgtcccggatcagacccatgaggaatgaacagtaccggggcaagaatccc
ctcttagtaccgctgctatatgacttccgtaggatgacagcccggcgtagagttaaccgc
aaaatgggcttccatgttatctataagacaccctgtggtctctgtcttcggacaatgcag
gaaatagaacgctacctttttgagactggctgtgacttcctgttcctggagatgttctgt
ttggatccatacgttcttgtcgacagaaagtttcagccttttaagcctttttactatatt
ttggacatcacctacggcaaggaagatgttcccctgtcctgtgttaatgagattgacaca
actcccccaccccaggtggcctacagcaaggagcgcatccctggcaagggtgttttcatt
aacacaggccctgaatttctggttggctgtgactgcaaggatgggtgtcgggataaatct
aaatgtgcctgccatcagctaactatccaagccacagcatgtaccccaggaggccaaatc
aaccctaactctggctaccagtacaaaaggcttgaagagtgtctgcctacaggggtttat
gagtgtaacaaacgctgcaaatgtgacccaaacatgtgcacaaatcgcttggtgcaacat
ggactacaggttcgactacagctatttaagacacagaacaagggctggggtatccgctgc
ttggatgacattgccaaaggctcttttgtctgtatttatgcaggcaaaatcctgacagat
gattttgcagacaaagaagggctggagatgggtgatgagtactttgcaaatctggaccac
attgaaagtgtggagaattttaaggaaggatatgagagtgatgtcgccagttcatctgac
agcagtggggtggacatgaaggaccaggaagatggcaacagcggttcagaggatcctgaa
gagtccaatgatgacagctctgatgataacttctgtaaggatgaagacttcagcaccagc
tcagtgtggcgtagctatgctacccggagacagactcggggtcagaaggaaaacggactg
tctgaggtggcttccaaggactcccgtcccccagaccttgggcctccaaatgttcctgtc
cctcctgcagtatctgtagggggctgcaagccaccttcatctgaagagacccccaagaac
aaggtggcctcgtggttgagctgcaacagtgtcagtgaaggtgggtttgctgattctgac
agccgttcttccttcaagaatagtgagcgtggagatggccgggctggggcaggccgggca
gaggctgagaaggcctctacctcaggattgagcttcaaggatgaaggagacaataagcag
actaagaaagaggatcctgatgaccgaaacaagatgtcagtagtcactgaaagctctcag
aattatggacacaatcctcctatgaagtctgatgggcttcgccgaccatctagtaaaact
tctatgccccaaagtcggcgacttggggcttctactcagtccaaccctgatgatatcctg
acactgtccagcagcacagaaagtgagggggaaagtggaatcagccgaaagcccactgct
ggtcagacttctgccacagctgttgacagtgatgacatccagaccatctcctctggctct
gatggcgatgactatgaggacaaaaaaaacttgactggtccaacgaagcgccaggtggca
gtaaaatcaacccgaggctttgctcttaaatcaacccatgggattgctattaaatcaacc
aacatggcttctgtggacaagggggagagtgcaccagttcgtaagaacacacgccagttc
tatgatggtgaagagtcttgctacatcattgatgccaaacttgaaggcaacctaggccgc
tacctcaatcacagttgtagccccaacctgtttgtccagaatgtcttcgtggatactcac
gatcttcgcttcccttgggtggccttctttgccagcaagaggatccgggctggaacagag
cttacttgggactacaactacgaagtgggcagtgtggaaggcaaagagctgctgtgctgc
tgtggggccattgagtgcagaggacgtcttctctaa

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