Cricetulus griseus (Chinese hamster): 100771702
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Entry
100771702 CDS
T02813
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03022
Basal transcription factors
cge03420
Nucleotide excision repair
cge05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100771702
09124 Replication and repair
03420 Nucleotide excision repair
100771702
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100771702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cge03021
]
100771702
03400 DNA repair and recombination proteins [BR:
cge03400
]
100771702
Transcription machinery [BR:
cge03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100771702
DNA repair and recombination proteins [BR:
cge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100771702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
VWA_3
Motif
Other DBs
NCBI-GeneID:
100771702
NCBI-ProteinID:
XP_027257418
UniProt:
A0A9J7FDE5
LinkDB
All DBs
Position
2:complement(318988785..319019743)
Genome browser
AA seq
425 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDETGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCNGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDETHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNSTEPGLTLGGYFCPQCRAKYSE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEISLEEYKGERFCYGCQGELKDQHVYVC
TVCQNVFCVDCDVFIHDCLHCCPGCIHKIPTPAGTHRSQKKASDLLELELKGSYKLPNEG
TGNRT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaagcggtgggaaggaggctacgagagaacatgggaa
attcttaaagaagatgaaactggatcacttaaggctacgatagaggatattctctttaag
gcaaagagaaaaagagtgtttgagcaccatggacaagtccgacttggaatgatgcgccac
ctttatgtggtagtagatggttccagaacaatggaggatcaagacttaaagcccaatagg
ctgacttgtactttaaagttgttggaatactttgtagaagaatattttgatcaaaatcct
atcagtcagattggaataattgtgactaagagtaaaagagctgaaaaactgactgaactt
tcaggaaacccaaggaaacacataacatctttgaagaaagctgtagatatgacctgcaac
ggagaaccatctctctataattccttaagcatggcaatgcaaaccctaaaacacatgcct
ggacatacaagtagagaagtactaatcatctttagtagcctgacaacctgtgatccatct
aatatttatgatctcatcaagaccctgaaggcagctaaaatcagagtgtctgttattgga
ttgtctgcagaggttcgagtttgcactgtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaacccattacaaagagttgttaacgcatcatgttagccctcctcct
gccagctcaagctccgaatgctcactcattcgtatgggattccctcagcacaccattgct
tctttgtctgatcaggatgcaaaaccatccttcagcatggcgcatttggataatagcact
gagccaggacttacactgggaggatatttctgcccacagtgtcgagcaaagtacagtgag
cttcctgttgaatgtaaaatatgtggtcttactttggtgtctgcacctcacttggcacga
tcttaccatcatttatttcctttggatgcttttcaagaaatttctctagaagaatataaa
ggagaaagattttgttatggatgtcagggggaattgaaagaccagcatgtctatgtttgc
acagtgtgccaaaatgttttctgtgtggactgtgatgtttttattcatgactgtctccac
tgttgtcctggctgtattcataagatcccaactcctgcaggtacccacaggagtcagaaa
aaggcatcagatctcctggaactggagttgaaaggcagttataaactgcccaatgagggt
actgggaaccgaacctag
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