Cryptococcus gattii: CGB_F0510W
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Entry
CGB_F0510W CDS
T02232
Name
(RefSeq) pre-mRNA splicing factor
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
cgi
Cryptococcus gattii
Pathway
cgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CGB_F0510W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgi03041
]
CGB_F0510W
Enzymes [BR:
cgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CGB_F0510W
Spliceosome [BR:
cgi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CGB_F0510W
Complex C
U5 SnRNP specific factors
CGB_F0510W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
HTH_39
Motif
Other DBs
NCBI-GeneID:
10189848
NCBI-ProteinID:
XP_003194575
UniProt:
E6R7N2
LinkDB
All DBs
Position
F:join(162551..162623,162675..164143,164195..165444,165496..165581,165633..167713,167769..168131,168183..168883,168946..169384)
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AA seq
2153 aa
AA seq
DB search
MSKKGGRDLSQFNYGAMSSLVVNQDRSVVRNDEPTGAPESLVGRIDPKTMGSRVQTTAPK
DLEKRKAKSKLTSADEVERSIRRAQEKSRTQFGTQGVLDTVAEMEGLRYRPRTAETREVY
ELLLGLTHTILGDQTQEVVRSAADTILESLKSEDLKEFDKRKDVESVLGQMDESTWAQLV
NLGKKITDYVEEEEGAADERQQAVDQEGVAVLFEDEDEESEDDFEIGGNPSDEDEDEDEE
EDEEESGAEAAENEQDALVLGGKPSKKTASTDSDRVSPRDIDGFWLQRLIATYYPDPVQS
SDFTSQALTLLSSDAELRDLENSLAEMFGYENFDLVAKLMKNRDVIVWCTKLARSSEEEK
QDVEVAMREKGVGWILRELRGIAKKPEHASVSVAIPKTATIQPGTIAQPRKTIDIDSLIF
SEGGHLLTAKKVRLPEGSFKRQMKGYEEIHVPEPKRREAVVGELVPITKMPEWTWPVWES
VKTRELNVIQSKVFPIAWGTSEPMLICAPTGAGKTNCAALTILRTISQFRDEATGFIDKD
AFKIIYVSPMKALVQEQVDAFSKRFSALGIRVAELTGDSQLTKQQISETQIIVTTPEKWD
VITRKSTDTSYTNLVRLIIVDEIHLLHDDRGPVLESILARTIRKMDQTHDDVRVVGLSAT
LPNYKDVATFLRVDPKQGLFYFDASFRPVGLKQQFIGVTEKKAIKRLQTINEVCYEKVLN
YAGRSQTLVFVHSRKETAKTAAFLRDTAMEKETLTQFINPEGASREILIQEAAQCKDAKL
KDLLPFGFGIHHAGMSREDRTTVEQLFFEGHIQVLCCTATLAWGVNLPAHTVIIKGTQVY
NPEKGKWSELSPQDVLQMLGRAGRPQFDTYGEGIIITNHGELQYYTSLMNQQLPIESQFV
SRMVDNLNAEIVLGNVRNRDEGVQWLGYTYLYVRMLESPKLYNVGADYQEGDDALVQKRA
DLIHSAAVLLEKGGLVRYDRATGVFQSTDLGRIASHYYIAYSSMSVYNKHLKPNMTMIDL
FRVFALSNEFRLIPVRQEEKLELAKLLERVPIPVKEGVDEPVAKVNVLLQAYISQLKLSG
FDIVTDMVFIQQSAGRIIRAMFEICLKKGWAQPMRAALDLCKMVERRMWKSMTPLRQFPR
INREVVQRAERKDFPWYRYFDLDAAELGELIGLPKSGAYIQSLVHKFPRLDLQAHVLPLT
RSLLKINVTLTPDFQWDRNVHGASQAFWIIVEDVDGENVLYHDQFILRERFAEDEHYVTI
TVPISEPVPPNYYLSVISDRWLQAESKLPISFAHLIRPEPFPPHTPLLELQPLPITALHN
KAFESFYPFEHFNKIQTQVFQALFTTDDSVFIGAPTGSGKTICAEFALLRLWSKKGKDVP
RAVCIEPYQEMVDVRVAEWSSKFEGLEKVIVALTGESTADLALLRKADVVVCTPSQWDLL
SRRWKTRKDVQNIGLLIADELQLIGGDVGSTYEVIVSRTRYVSQQTGITTRIVACSVSLS
NARDLGDWIGANSQTVFNFSPAARPLPLEVHLQSFNVPHFPSLMLAMAKPAYLSMVEHSA
GRPTICFVPSRKQCKLTANDILTYCLADDDETRFLNVEREDLEPHLERLNDEDLKETLRY
GIGYYHEALSKLDKKIVTTLFEEGAIKVLVASKDTAWSLPATAYMVIIMGVQYFDGQEHR
YVDYAIADVLQMMGRACRPMIDTSSRCVLMCQQTRKDFFKKFLNEALPVESSLPSFLHDH
FNAEIVARTIENKQDAVDWCTWTWFYRRLMQNPGFYNLQGTTPTHIGEYLSELVETTLND
LVNSDCIIIQDDMDTLPNNLGMIASFYYISYITVEIFSQSIKETTKLKGLLEIVSSAHEF
ETVPIRHHEDTLLERIYDRVPVKVAKVDYNSPYFKTFLLLQAHFSRMTLPPDLAIDQSAI
LGKVTGLLSAAVDVMSSKSLLGCLGAMDLSQMCVQAIWDRDSPLKQVPYFDADVLGRFKA
KGLDSVYDIMELEDDERNDLLRMSDRQLARVAKFVNSYPNIEVSYDVEDASSLTSSEPVV
LNITLDREADEDNPEDQVADASHFPHKKMVSWWLVVGDEKTKSLYAIKKVTVKATLKTKL
EFTLPEGDWNLKLFLICDSYAGADQDFDIETLKVAEGESSDEESSEEEMEVDN
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaaaggcggtagggatctttcccagttcaactacggggcgatgagctccctc
gtagtgaatcaagatcgctctgttgtgaggaacgacgaacctacaggtgctcctgagtcc
cttgtaggacgtattgaccccaagactatgggttcacgcgtgcaaacaactgcacctaaa
gatcttgaaaaacgaaaagccaaatctaaacttacttctgccgatgaggtcgagcgctcc
atccgccgagcacaagagaaatctcgcacccagttcggtacacaaggcgtcctggacacg
gtggccgaaatggaggggttgagatacaggccaagaacagcagaaacaagagaagtgtat
gagttgttacttggattaactcacacaattttgggcgaccaaacgcaagaggtcgtgcga
tctgctgcggatacaatattggaatcgcttaagtcggaagatttgaaggagtttgacaaa
cgaaaagatgttgaatctgtacttgggcaaatggatgagtctacctgggctcagcttgtc
aacttggggaagaaaattacagattatgtggaagaagaggagggtgcggcggatgaaagg
cagcaggcagtagaccaagagggtgtcgcagtcctcttcgaggacgaagatgaggaaagt
gaggacgactttgagattggtggtaacccatcagacgaggacgaggacgaggatgaagaa
gaagacgaagaagagtcaggagcggaggcggctgaaaatgagcaagatgcgcttgttctt
ggtggcaaaccgtcgaaaaagactgcgtctaccgattccgatcgggtttctccccgtgat
attgacggcttttggttacaacgtcttatcgccacctactatcctgatccggtccaatct
tctgacttcacctctcaggcactcactctcctttcttcggacgccgaacttcgagatctc
gaaaacagtctggcagaaatgtttggttacgaaaattttgacttggtcgccaagttaatg
aagaacagggatgtcatcgtctggtgtacaaagctcgcgaggagtagcgaggaagagaag
caggatgtcgaggttgcaatgcgagagaagggtgtcggatggatcctccgagagttgcgt
ggtattgccaagaagccggagcacgcgtccgtctctgttgctatccccaaaaccgccact
attcagcccggtaccattgcccagccccgcaagaccatcgacattgactctcttattttc
agcgaaggtggtcatctccttactgctaagaaggtccgtcttcctgaagggtctttcaag
cgtcaaatgaagggctatgaggagattcacgtgcctgagccaaaacgtcgcgaggctgtc
gtaggtgaattggtgccgattaccaagatgccagaatggacatggcctgtctgggagagt
gtgaagaccagagagttgaatgtaatccagagcaaggtgttccctattgcttggggaaca
agtgagccgatgttaatttgtgctcctaccggtgcgggaaaaaccaactgtgccgccctg
accattcttcgaacgatttcgcaattccgcgatgaggccactggtttcatcgacaaggac
gccttcaagattatctatgtctcacccatgaaggctcttgttcaagaacaagttgatgcg
ttttccaagcgtttctctgccctcggtattcgtgtcgcagagttgactggtgacagtcag
ttaacaaagcagcaaatctctgaaacgcaaattattgtcaccaccccagagaaatgggat
gttatcactcgaaaaagcacagataccagctacaccaatctcgtgaggttgattatcgtc
gacgagattcatcttttgcacgacgatcgaggacctgttttggaaagtattcttgcgagg
accattagaaagatggaccagacacatgatgacgtccgtgtcgtcggcttgtccgcgacg
ttgccgaattacaaggatgttgctactttccttcgtgttgatcccaagcaaggtcttttc
tactttgacgcttccttccgtcccgtcggtctcaagcaacagtttattggtgtcactgag
aagaaggcaatcaagcgtctgcaaacgattaatgaggtctgctacgaaaaggttctcaac
tacgccggccgatcacaaactcttgtatttgtccactctcgaaaggaaacagccaagacc
gccgcgttcctccgtgataccgctatggaaaaggagaccttaactcagttcattaaccct
gaaggtgcctcccgcgagatccttatccaagaagccgctcaatgcaaggatgccaagctt
aaggacctcttgcccttcggtttcggtatccaccacgctggtatgtcccgagaagaccgt
actactgtcgaacaattgttcttcgaaggtcacattcaagttttgtgctgtaccgctaca
ctggcttggggtgtcaaccttcctgctcacaccgtcattatcaaaggtactcaggtgtac
aatcctgaaaagggtaaatggtctgagctctcccctcaagacgtccttcagatgcttggt
cgtgccggtagaccacaatttgacacttatggtgaaggtatcatcatcaccaaccatgga
gaactgcagtactacacaagtttaatgaatcaacagttgccgattgaaagtcaattcgtg
agcaggatggttgacaatttgaatgccgagattgtgctcggaaatgtcagaaatagagac
gaaggtgtgcaatggttgggttatacttacttatatgtgcgaatgttggagtctcccaag
ctatacaatgtgggtgcagactaccaagagggcgacgacgcgctcgttcagaagcgagcc
gatttgatccattccgctgctgtcctcctcgagaagggaggtctcgttcgctatgaccgt
gctactggcgtcttccaatctaccgacctcggccgtattgcatctcattactacattgct
tattcgtcaatgtccgtgtacaacaagcaccttaagcctaacatgaccatgatcgacctc
ttccgggtgttcgctttgagcaacgaattcaggttgatcccagtcaggcaagaggagaag
ctggagttggccaagttacttgagagagtgccgatacccgtgaaggaaggtgtggacgag
cctgtggccaaggtgaatgtgcttttgcaagcgtatatctcgcagcttaagctctccggg
ttcgacatcgtcacagacatggtttttattcaacaatctgctggtcgtattatccgcgca
atgtttgaaatctgcctcaaaaagggctgggcgcaacccatgcgggctgctcttgatctg
tgtaaaatggttgagagaaggatgtggaagtctatgactcccctcaggcaattccctagg
atcaaccgtgaggttgttcagcgtgcagaaaggaaggacttcccttggtacaggtacttt
gatctcgacgccgctgaactaggagagttgattggtttgccaaagagcggagcttatatc
cagtctcttgttcataagttcccccggctcgatcttcaagctcacgtgctgcccctcact
cggtcacttctcaagatcaatgtcactcttactcctgacttccagtgggatcgcaatgtc
catggcgccagccaagccttttggatcattgtggaggacgtggatggcgagaatgtcctt
tatcatgaccagtttatcttgcgagagaggttcgcggaagatgagcattacgtgaccatc
accgtccctatctctgagcctgtaccccccaactactatctgtctgtcatctctgacagg
tggttgcaggcggagagcaagttgcccatctcatttgctcacttgatcaggcccgaacca
ttccctcctcacactcctttgcttgaactacaacctttgccgattacagcccttcacaac
aaggctttcgagtctttctaccctttcgaacacttcaacaagatccagacccaagttttc
caggctctcttcactactgacgacagtgtcttcatcggtgcgcctacaggaagcgggaaa
actatctgtgcggagtttgcgttgttgagactttggagcaagaaggggaaggatgtgccg
agggcggtatgcattgagccttaccaggagatggtggatgttcgggtagcggagtggtcg
agcaagtttgagggactggagaaggtgatcgtcgccctcaccggagagtcaacggctgat
ctggcgctattacgaaaagcggatgttgtcgtttgcactccctcgcagtgggatttgctt
tctcgaagatggaagacaaggaaggatgtgcaaaatatcggtttgctgattgccgatgag
cttcaacttatcggtggtgatgtaggttccacctacgaggtgattgtttccagaacgaga
tatgtatctcagcagacgggaatcactaccaggatcgtagcctgcagtgtgagcttaagc
aatgctagggatttgggtgattggatcggagccaatagtcaaaccgtgtttaacttctct
cctgccgctcgacctcttcctctcgaggtacatttacagtctttcaacgtgccccatttc
ccctctctcatgcttgccatggccaaacccgcctacctgtccatggtggaacattctgct
ggccgacctaccatctgcttcgtcccctcgcgcaagcaatgtaagctcactgccaatgac
atccttacgtactgccttgcggatgacgatgagactcgattcctcaatgttgagagagaa
gatttggagccacacttggagaggttgaatgacgaggatttgaaggagacattgaggtat
ggtatcggatactatcacgaggctctgagcaagttggacaaaaaaattgtcactacattg
ttcgaggagggcgctatcaaggtgcttgtggcttctaaggacaccgcttggagtcttcct
gcgactgcttatatggtcatcatcatgggtgtccagtacttcgatggtcaggagcaccga
tacgttgattatgccatcgccgatgtcctccaaatgatgggccgagcctgtcgcccaatg
attgatacctcttctcgctgcgtgttgatgtgtcagcagacccgaaaagactttttcaaa
aagttcttaaacgaggcattgcctgtcgagtcaagtttaccgagcttcttgcatgatcac
ttcaacgctgagattgtggcgaggactattgagaataagcaggatgccgtggattggtgt
acttggacttggttttataggagactaatgcagaaccctgggttttacaatctgcagggt
accactcccactcatattggcgagtacctttctgaactcgtcgaaactaccttgaatgac
ttagtcaactcggattgcattatcatccaagacgatatggacacgctccccaacaacttg
ggtatgattgcatccttctactacatctcatacatcactgtcgaaatcttctcgcaatcc
atcaaggaaaccaccaaactcaagggcttgcttgagattgtctcgtcagcgcatgagttt
gagaccgttcccatcaggcaccatgaagacactcttcttgaaaggatttacgaccgtgtg
cctgtcaaggttgccaaagtcgattacaattcaccctacttcaagactttcctcctgctt
caagctcatttcagccgtatgactcttccccccgacttggctatcgatcaatcggccatt
cttggcaaggtaaccggtcttctttcagccgctgtagatgtcatgtccagcaagagttta
cttggatgcctgggtgcgatggatcttagccaaatgtgtgtgcaggcgatttgggatcgg
gattcgcctttgaaacaggtgccttactttgacgccgacgtccttgggaggttcaaggcc
aagggtttggactctgtttatgacattatggaactggaagatgacgagaggaatgatttg
ttgagaatgagcgacagacagcttgcccgggttgccaagttcgtcaactcttatcctaac
attgaggtttcctacgatgtcgaagacgcctcttctcttacctcctccgaacctgtggtc
ctcaatattaccctcgatcgcgaagctgacgaagacaaccctgaagaccaagtggccgat
gcatcccacttccctcataagaagatggtttcgtggtggctggtggtgggtgacgaaaag
actaaatcgttgtacgcgatcaagaaggttactgtcaaagcgacactcaagaccaagctt
gagtttacactccctgaaggagactggaatttgaagctgttcttgatctgtgatagctat
gctggtgcggaccaggactttgatatcgagacccttaaggtggcggaaggagagagctct
gatgaggagtcgtcggaggaggagatggaggtggataattag
DBGET
integrated database retrieval system
