Corynebacterium glutamicum MB001: cgp_2987
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Entry
cgp_2987 CDS
T02791
Symbol
dacB
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
cgm
Corynebacterium glutamicum MB001
Pathway
cgm00550
Peptidoglycan biosynthesis
cgm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
cgp_2987 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgm01002
]
cgp_2987 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgm01011
]
cgp_2987 (dacB)
Enzymes [BR:
cgm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
cgp_2987 (dacB)
Peptidases and inhibitors [BR:
cgm01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
cgp_2987 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cgm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
cgp_2987 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
AGT06415
LinkDB
All DBs
Position
complement(2641295..2642578)
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AA seq
427 aa
AA seq
DB search
MKNAWWVGSSVGVLIAVGAVIGGGVWVNHSGFGLDHPEPMSVEMPEQLFSSAIDPDALEA
PDFATLEKDLTSQAADSRLGTFVGVARDVESGEVVWEQNQGTAVRPASATKILTAAVALY
ELGREDTITTKVVEGEQPGTVVIKAGGDVTLSEEMLDDLATQLEGQDIGTVLIDTSIWPD
EGFASTWDPVDVDAGYIADVEPAMIEAARIGGSEGDLPRSHTPALDVAQALADRVGADTV
DEGSAPDKTVLASVESDTLDQRLARMMKDSDNVMAEGIAKEVAASKDLATDSASTSKMTL
EILKDKGFDLSGVSIVDNSGLSFDNLITPRLLDDILTRAATEPELSSLLTSLPIAHGTGT
LEDRYDGLSGAGWVRAKTGTLTDTSALAGVVTSESGRVFTFAFVSNGSAIVPAREALDEM
ASILRDF
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgcgtggtgggttggctcatcggttggtgtactgattgcagtgggggctgtc
atcggtggtggcgtgtgggtgaatcattctggttttggtttggatcacccggagcccatg
tcggtggagatgcctgagcagctgttttcttctgcgattgatccggatgctttggaagcc
ccagattttgccactttggagaaggatttgacctcgcaggctgcggattctcggttgggc
acttttgtcggtgttgccagggatgtggaatctggtgaggtggtgtgggagcagaatcag
gggactgcggtgaggccggcgtcggcgacgaagattttgacggcggcggtggcgttgtat
gagcttggccgtgaggacaccatcacaacgaaggttgttgagggggagcagccgggaacg
gtggtgattaaggcgggtggtgatgtcacgttgagtgaggagatgctcgatgatttggcc
acccagcttgaggggcaagatattggcactgtgttgatcgatacgtctatttggcctgat
gagggctttgctagtacgtgggatccagtggatgttgatgctggttatatcgctgatgtg
gagcccgcgatgattgaggctgcccgcattggtgggtcggagggggatctgccgaggtct
catactccggcgttagatgttgcgcaggcgttggcggatcgtgtcggcgcggacaccgta
gatgagggcagcgctccggacaaaaccgtgctggcatccgtggagtctgacacgttggat
cagcgtcttgctcggatgatgaaggattctgacaatgtgatggcagagggtatcgctaag
gaagtggccgcgtcgaaggatttggctaccgattcggcgagtacctcgaagatgacgttg
gagattctcaaggacaagggcttcgatttgagtggcgtgtccattgtggataattcgggt
ttgagctttgacaacctcatcacgccccgcctgcttgatgatattttgacccgcgccgcc
acggaacctgagttgagttcactattgacatcgctgcctatcgcgcatggaaccggaacc
ttggaggatcgctacgacggactctcaggtgcgggttgggtgcgggcgaaaactggcact
ctgacggatacatcggcattggcaggggtggtgacctcggagtcggggcgtgtgtttacc
tttgcttttgtgtctaatggttccgcgattgtgccggcgcgtgaggctttggatgagatg
gcgtcgattctgagggacttttaa
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