Chlamydia gallinacea: M787_003120
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Entry
M787_003120 CDS
T04276
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
cgz
Chlamydia gallinacea
Pathway
cgz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M787_003120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgz03019
]
M787_003120
03016 Transfer RNA biogenesis [BR:
cgz03016
]
M787_003120
Enzymes [BR:
cgz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
M787_003120
Messenger RNA biogenesis [BR:
cgz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M787_003120
Transfer RNA biogenesis [BR:
cgz03016
]
Prokaryotic type
tRNA degradation factors
M787_003120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
RNase_II_C_S1
COG6_N
Motif
Other DBs
NCBI-ProteinID:
ANG66300
UniProt:
A0A173DZE3
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All DBs
Position
complement(679405..681423)
Genome browser
AA seq
672 aa
AA seq
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MKKIKKRRSKKIFKKHTKQILISGTLFVHGKKGFGFVSPDHPDEYPFDIFIPARDLKGAL
DGDHVIVSLLPSSKKGEKRKGVIHEVLSRGKTILVGTITSLLNATTALVCVNALGPDTPV
QATLLPKRSYKLGDRILLSTPEWKKKNESKANPPLKMLEFIGNISNAKSDFLCIKAEYGI
EEDFPEAVIEETTHFSQKHISQALRSRKDLRDLLCFTIDSITAKDFDDAVSLTYDNNNNY
ILGVHIADVSHYVTPHSALDKEASKRCNSIYFPGKVVPMLPSALSDNLCSLKPNVDRLAV
SVFMTFTKAGHLSNYEIFRSVIRSKYRMTYDEVNEIIKKKQAHPISKTLQEMAKLSKKFS
DLREQRGCIHLELPSFTISLDNLQEPVALVETRQTLAHKLIEEFMLKANEVIAYHISHQG
VPLPFRIHESPNDEHLLSFQEMAKAMGFTIPVTPEQEPDYQYLLQTISKGHPLEPILHSQ
FVRSMKTASYSTENKGHYGLKLDFYTHFTSPIRRYIDLIVHRLLFHPLSIEETRLEHIVR
ACSTQERVTAKAEFAFETLKKTRFLSQFLKEQPDTTYTAYIITTNPEGIAFTVPEFFQEG
FIPAAQLPKEYTIKKKTSPEDLPSKIRPGAKISVRLISVDLLRQTITWALVKKTTTIIPK
THKTKSRKKKIK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaataaaaaaaagaagatcaaaaaaaatctttaaaaaacatactaagcaaatc
ctaatttcaggaactttattcgttcatggaaaaaaaggtttcggatttgtttctcctgac
catcccgatgagtatccctttgatatctttattcccgcaagagatcttaaaggagctcta
gatggagaccatgttattgtttctcttctccccagctcgaaaaaaggagaaaaaagaaag
ggagtaattcacgaagtcctctccagaggaaaaactattctcgtggggacaattacttct
ttactaaatgcaacaacagctcttgtctgcgtcaatgctttgggaccagatacgcccgta
caagctactctccttcctaagcgttcctataaacttggagatcgaatacttctcagcact
cccgaatggaagaaaaaaaacgaatccaaagccaatcccccattaaaaatgctggaattc
attggaaatatttctaatgcaaaatcagattttctctgcatcaaagcagaatacggcatc
gaagaagattttcccgaagccgtgattgaagaaactacgcatttctctcaaaaacacatt
agtcaagccctacgatctagaaaagatcttcgtgatcttctatgtttcactatcgactcc
attactgctaaagattttgatgacgccgtctccctaacttatgacaataataataactat
atcctcggtgtacatattgctgatgtttctcattatgtcactccgcactcagccttggat
aaagaagctagtaagcgatgcaactcgatttatttcccaggcaaagtagttcccatgtta
ccctcagctctttctgataacctctgcagcttaaaaccgaatgttgatagacttgccgtc
tcagtattcatgacattcacaaaagcaggacacctctcgaactatgagatatttcgtagc
gttatccgtagcaaataccgtatgacgtatgacgaagttaatgagattatcaagaaaaaa
caagcacatcccatttctaaaactctgcaagaaatggcaaaactaagtaaaaaattctct
gatctccgagaacaacgtgggtgtatccatctcgaactaccgtcatttactatctcctta
gataaccttcaagagcctgtagctctagtagaaacgcgacaaacactagcacataaactc
atagaagaattcatgttaaaagctaatgaagtgatcgcttatcatatctcacatcaaggc
gttccactcccatttcgaattcatgagtcccctaatgatgaacaccttctctccttccaa
gaaatggccaaagccatgggatttactattcccgtgacccccgaacaagaaccagattac
cagtaccttctacaaacaatctctaaaggacatcctttagaacctatccttcactcacaa
tttgtacgaagtatgaaaacagcttcttactctacggaaaataaaggacattacggacta
aaactggacttctacactcacttcactagcccaatccgtcgctatatcgacctcattgtc
catcgcctactcttccatcccctatctatagaagaaacacgcttagaacatatcgtacgc
gcctgctcaacacaagaacgtgtcacagcgaaagccgaatttgcatttgaaactctaaaa
aaaacacgcttcctcagccaatttttaaaagaacaaccagacactacctatacagcatat
atcattacaaccaaccccgaaggaattgcattcacagttcccgaatttttccaagaaggc
tttatacctgcagcccaactacctaaagagtataccattaaaaagaaaacatcccccgag
gatctcccaagtaaaatacgtccaggagccaaaatttctgtacgcttaatatctgtggat
cttctaagacaaacgattacctgggctttagttaaaaaaacgacaacgatcatcccgaaa
acacacaaaacaaaaagtcgaaaaaagaaaataaaataa
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