Chitinophaga agri: GWR21_00590
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Entry
GWR21_00590 CDS
T06416
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chih03400
]
GWR21_00590 (sbcD)
DNA repair and recombination proteins [BR:
chih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GWR21_00590 (sbcD)
Archaeal homologous recombinant proteins
GWR21_00590 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
QHS58142
UniProt:
A0A6B9Z7D6
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Position
complement(143159..144400)
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AA seq
413 aa
AA seq
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MKILHTADWHIGQTFYQYDRTYEHQQFLYWLTDTIKKEDIELLIISGDVFDVANPSATSV
KLFYSFLNSAMKAQPGLQIIVTAGNHDSAARLEAPKPLLESSDIHIIGTIERKEDGTIDY
EKMLIPVKDRTGATVLWCMAIPFLRMGDYPAVAESETPYVDGVVALYRESYEHALTIKQP
DQGIIAMAHLHTLNAEKNEHDDKERLIMGGVEYVPVSAFHDDIIYTALGHIHKAQKIGGK
ENIRYSGSPLPMSFSERNYKHQVVTFDITGGVLSNVALLEIPVTTELLRVPAKPQPLATV
LEELLQLPAATDHLHTAPYLEVRVLLEGPEPALRHKIETALTGKHVKLAKIETSRLSSGE
NETDTVMRTDQLQELKPLDIFQKAFKASYNNEAPEELVSLFNQVLQEITTKEQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattgcatactgcagactggcatataggacaaaccttctatcagtatgacaga
acatatgaacaccagcagttcctgtactggctgacagataccattaagaaagaagatatt
gagttattgatcatcagtggggacgtgtttgatgtagctaacccctccgctacttcggtt
aaattattctattcctttctcaatagtgccatgaaggcacaacccggtttacagatcatt
gtcacggcaggtaaccatgactcagcagcaaggctggaagcgcctaaaccgctgctggaa
tcgtctgacattcatattatcggtacgatcgagcggaaagaagatggtacgatcgactat
gaaaaaatgctgatccctgtgaaggatagaacaggggcaacggtgctctggtgtatggct
atccctttcctgcgcatgggagactatcccgcggtagcggaaagcgagacgccctatgtg
gatggggtggttgccctctacagggaatcctatgagcacgcgctgaccataaagcaaccg
gaccagggcatcatcgccatggcacatctgcatacactcaatgccgaaaagaatgagcac
gatgataaagaaagactgatcatgggtggggtggaatatgttcctgtcagcgccttccat
gacgacatcatctataccgcattaggacacatacacaaagcccagaaaataggcgggaaa
gaaaacatccggtacagtggtagtccgctgcccatgtcattttcagaaaggaactacaaa
caccaggtagtgactttcgatattaccggcggcgtactcagtaatgttgccctgctggag
ataccggtcaccaccgagctgctacgcgtaccggctaagccgcagccactggccactgta
ttagaagagctcctgcagttaccagcggctactgaccatctgcacaccgcgccttacctg
gaagtacgtgtgctgctggaagggcccgaaccggcattaagacacaagatagaaaccgcc
cttaccggcaaacacgtaaagctggcaaagattgaaacaagccgcctgtcatccggagaa
aatgaaacagacactgtgatgcgcacagatcagctgcaggaattaaagccactggatata
tttcagaaggcctttaaagccagctataacaatgaagcaccggaagaactggtcagcctt
ttcaaccaggtattgcaggagatcactacaaaagagcagtaa
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