KEGG   Chitinophaga agri: GWR21_00590
Entry
GWR21_00590       CDS       T06416                                 
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
chih  Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:chih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chih03400]
    GWR21_00590 (sbcD)
DNA repair and recombination proteins [BR:chih03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GWR21_00590 (sbcD)
    Archaeal homologous recombinant proteins
     GWR21_00590 (sbcD)
SSDB
Motif
Pfam: SbcD_C Metallophos
Other DBs
NCBI-ProteinID: QHS58142
UniProt: A0A6B9Z7D6
LinkDB
Position
complement(143159..144400)
AA seq 413 aa
MKILHTADWHIGQTFYQYDRTYEHQQFLYWLTDTIKKEDIELLIISGDVFDVANPSATSV
KLFYSFLNSAMKAQPGLQIIVTAGNHDSAARLEAPKPLLESSDIHIIGTIERKEDGTIDY
EKMLIPVKDRTGATVLWCMAIPFLRMGDYPAVAESETPYVDGVVALYRESYEHALTIKQP
DQGIIAMAHLHTLNAEKNEHDDKERLIMGGVEYVPVSAFHDDIIYTALGHIHKAQKIGGK
ENIRYSGSPLPMSFSERNYKHQVVTFDITGGVLSNVALLEIPVTTELLRVPAKPQPLATV
LEELLQLPAATDHLHTAPYLEVRVLLEGPEPALRHKIETALTGKHVKLAKIETSRLSSGE
NETDTVMRTDQLQELKPLDIFQKAFKASYNNEAPEELVSLFNQVLQEITTKEQ
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgaaaatattgcatactgcagactggcatataggacaaaccttctatcagtatgacaga
acatatgaacaccagcagttcctgtactggctgacagataccattaagaaagaagatatt
gagttattgatcatcagtggggacgtgtttgatgtagctaacccctccgctacttcggtt
aaattattctattcctttctcaatagtgccatgaaggcacaacccggtttacagatcatt
gtcacggcaggtaaccatgactcagcagcaaggctggaagcgcctaaaccgctgctggaa
tcgtctgacattcatattatcggtacgatcgagcggaaagaagatggtacgatcgactat
gaaaaaatgctgatccctgtgaaggatagaacaggggcaacggtgctctggtgtatggct
atccctttcctgcgcatgggagactatcccgcggtagcggaaagcgagacgccctatgtg
gatggggtggttgccctctacagggaatcctatgagcacgcgctgaccataaagcaaccg
gaccagggcatcatcgccatggcacatctgcatacactcaatgccgaaaagaatgagcac
gatgataaagaaagactgatcatgggtggggtggaatatgttcctgtcagcgccttccat
gacgacatcatctataccgcattaggacacatacacaaagcccagaaaataggcgggaaa
gaaaacatccggtacagtggtagtccgctgcccatgtcattttcagaaaggaactacaaa
caccaggtagtgactttcgatattaccggcggcgtactcagtaatgttgccctgctggag
ataccggtcaccaccgagctgctacgcgtaccggctaagccgcagccactggccactgta
ttagaagagctcctgcagttaccagcggctactgaccatctgcacaccgcgccttacctg
gaagtacgtgtgctgctggaagggcccgaaccggcattaagacacaagatagaaaccgcc
cttaccggcaaacacgtaaagctggcaaagattgaaacaagccgcctgtcatccggagaa
aatgaaacagacactgtgatgcgcacagatcagctgcaggaattaaagccactggatata
tttcagaaggcctttaaagccagctataacaatgaagcaccggaagaactggtcagcctt
ttcaaccaggtattgcaggagatcactacaaaagagcagtaa

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