Chitinophaga agri: GWR21_20270
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Entry
GWR21_20270 CDS
T06416
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chih01002
]
GWR21_20270
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chih01011
]
GWR21_20270
Peptidases and inhibitors [BR:
chih01002
]
Cysteine peptidases
Family C82
GWR21_20270
Peptidoglycan biosynthesis and degradation proteins [BR:
chih01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GWR21_20270
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QHS61852
UniProt:
A0A6B9ZHG1
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Position
5093733..5095295
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AA seq
520 aa
AA seq
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MRDTSHYTQQEYIDLTLDSNTVNRFLETDTAYAEYIRDFYRQRDFHYAWIGNDGQLTEQA
GNFINMMKADAEYGLHDSTVISKPLREMYDTLLMEGEKLRPGDKAAPTAELLLTAQFFAY
GNKVWSGLTSDSAKSLEWFIPRKKINMESLLDSMVNKPASAFEEPVNKQYKLLRDQLKKL
DVLEKMQWDSLKGTRKIYKAGEQDILIAGVKHRLHLLGDLAVADTSQLFTPALDSAIRNF
QDRTGLKPDGTIQQSLLNALNITPKQRIRQILINMERIRWVPAEPPAKYLLVNIPAFKLY
VYDNNQLDWSCNVVVGKPGANTVIFSNEVKYVVFAPYWNVPPGILVHEVLPAMRKNPGYL
ARQNMEVVTGSGGPVNAGSLNWSKYSGGNFPYIIRQKPGGHNALGKVKFLFPNEYNIYLH
DTPSKGLFGENKRTFSHGCIRVSAPQQLAEWLLRSDSSWTKQKIVEAMNGSKEKFVSLKE
RVPVYIGYFTAFVDSDGRLNFRDDVYGHDAKLAATLFGSK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgagagacacctcccattatacccaacaggaatatatcgatctcacgctggacagtaac
acggttaacaggttcctcgaaacagataccgcttatgctgaatacatccgtgatttctac
cgccagcgtgattttcactatgcatggatcggcaatgatggtcagctgacagagcaggca
ggtaacttcatcaatatgatgaaagcagatgcggagtatgggctgcacgacagtaccgtg
atcagtaaacccctccgtgaaatgtatgatacattgctgatggagggagaaaaactacgc
ccaggtgataaagctgcccctacagcagagctgctcctcaccgcgcagttctttgcctat
ggaaataaggtatggagcgggttgacgtcagatagtgccaagtcgctggaatggtttatt
ccacgtaagaaaataaacatggaaagcctgctggattccatggtgaataagcctgcaagc
gcatttgaagagccggtaaacaaacagtataaattgctgcgcgatcaactgaagaaactg
gatgtgctggagaaaatgcagtgggattctttaaagggaacccggaaaatatataaagca
ggcgaacaggatatactgatcgcaggtgtaaaacacagactgcatctgctgggagatctg
gccgtagccgatacctcacagttgtttacacccgcactcgactctgctatccgtaatttc
caggatcgtacaggactcaaacccgacggtaccatccagcaatctttgctgaatgccctg
aacattactcctaaacaacgtatccgtcagatactgatcaatatggaacgtattcgctgg
gtgcctgctgaaccaccggcaaaatacctgttggtcaatatccctgcatttaaactctat
gtatatgataataatcagctggactggagttgcaatgtggtagtcggaaaaccgggcgca
aatacggtcatcttcagcaatgaagtaaaatatgttgtcttcgctccctactggaatgta
cctcccggtatacttgtgcacgaagtattacctgcaatgaggaaaaatccaggttacctc
gcacgacagaatatggaagtggtgactggttcaggtggcccggtaaatgcagggtcgctg
aactggagtaaatactcaggcggcaatttcccttatatcatacgacagaaacccggcgga
cataacgcattagggaaggtaaaattcctgttccccaatgagtacaacatctacctgcac
gatacgccttccaagggtttatttggagaaaataaacgcacattcagccatggttgtatc
cgcgtatcagcaccacagcagctggcagaatggctgttgcgcagtgattcttcctggaca
aaacaaaagattgtggaagccatgaacggtagcaaagagaagttcgtcagcctcaaagaa
agagtgccggtatatataggttattttactgcgtttgtagacagtgacggccggctgaat
ttccgtgatgatgtatacggacatgatgctaaactggcagccacattgtttggcagtaag
taa
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