Chitinophaga agri: GWR21_24970
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Entry
GWR21_24970 CDS
T06416
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chih03009
]
GWR21_24970
Enzymes [BR:
chih01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
GWR21_24970
Ribosome biogenesis [BR:
chih03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GWR21_24970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QHS64092
UniProt:
A0A6B9ZP54
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All DBs
Position
complement(6226186..6227262)
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AA seq
358 aa
AA seq
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MLMAEELIEIDDELENGEGSEELYERVNIIADKGQEPLRVDKFLMNRVEGATRNKIQQAC
DNGMVTVNDKPVKSNYKVKAHDHIVVFSNKNPENTAVLPEEMPLDIVFEDDDIMIINKLP
GMVVHPGCGNYTGTLVNGLAWYLGDRNAEPVPIPEIPRFGLVHRIDKNTSGLLVIAKTDK
AMNDLAKQFFDHTVQRRYLALVWGDFEEDEGTIEAHVGRHQRFRKIMDAYPDGEYGKEAI
THYKVLERFNYVTLIECRLETGRTHQIRVHMQHIGHSLFNDDTYGGNRILKGTVFAKYKQ
FVENCFEIMPRHALHAKTLGFIHPRTRQPIHFESPLPDDFKAVLEKWKRYVSARPLEE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atcctcatggcggaagaactgattgaaattgacgatgaactggagaacggcgaaggcagc
gaggagctgtacgagcgggtaaatattatagcggacaaaggacaggagccacttcgtgtg
gacaagttcctcatgaaccgggtggaaggtgcaacccgtaacaaaatacagcaggcctgt
gataatggcatggtcaccgtcaatgacaaaccggttaaatccaactataaggtaaaggca
cacgatcatatcgtcgtgttttccaataaaaatcctgagaatacggctgtgcttccggaa
gaaatgccgctggacatcgtatttgaagatgatgatatcatgatcatcaacaagttaccc
ggtatggtcgtacacccgggctgtggtaactataccggcacactggttaacggactggcc
tggtacctgggcgaccgcaatgcggagcctgtaccgatacctgagatcccacgtttcgga
ctggtacaccgtatcgataagaatacgagtggattgctggtgatcgccaaaacggacaag
gcgatgaatgacctggcaaaacagttcttcgaccatactgtgcagcgccgctatctggcc
ctggtatggggtgactttgaggaagacgaaggaacaattgaagcacacgtgggccgccac
cagcggttccgtaaaataatggacgcctatccggatggtgaatatggaaaagaagccatc
acacattataaggtactggaacgttttaactatgtgacactcatcgagtgccgcctggaa
accggccgtacacaccagatcagggtgcatatgcagcatatcgggcactccctgttcaac
gacgacacctatggaggaaaccgtatcctgaaaggcaccgtatttgccaaatacaaacag
tttgtcgaaaactgcttcgagattatgccacgccatgccctgcacgcgaaaacactcggt
tttatacacccgcgtacccgccaacctatccattttgaaagtccattacctgatgatttt
aaagcagttctggaaaaatggaagcggtatgtaagtgccagaccgctcgaggagtaa
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