KEGG   Chitinophaga sp. XS-30: FW415_16185
Entry
FW415_16185       CDS       T06207                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
chit  Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:chit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chit03021]
    FW415_16185
Transcription machinery [BR:chit03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FW415_16185
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF DNA_pol3_delta_C UPF0122 HTH_WhiA GerE
Other DBs
NCBI-ProteinID: QEH42327
UniProt: A0A5B9WNN3
LinkDB
Position
3969653..3970171
AA seq 172 aa
MSSEVFMTQIMPIKQKLYRFALRLLGNEEDAKDIIQDALIKVWHNKEKMGELQNLEAWCM
RITRNLALDKIKSRKYRMTDDLGRAQEVPASPQHNPHQTAEKSDLMRRVHGLINKLPEKF
RTILQLRDMDGLSYQEIAEVLEIEMSEVKVNLHRARKQVREQLQNLHVYGTQ
NT seq 519 nt   +upstreamnt  +downstreamnt
atgtcgtctgaagtatttatgactcaaatcatgcctatcaagcagaagctctatcgcttt
gcgcttcgtttgctgggtaatgaggaggatgcgaaggacatcattcaggacgccctgatc
aaagtgtggcacaacaaggaaaaaatgggagaattgcagaacctggaagcatggtgtatg
cgcattacccgcaacctggcgctggacaagatcaaaagccggaaataccggatgaccgat
gatcttggccgggcgcaggaagttccggcaagcccgcagcacaacccgcatcagaccgca
gaaaagagcgatctgatgcgccgggtgcacgggctgatcaataaactgccggagaaattc
cgcacgatcctgcaattgagggatatggatgggttgagttaccaggagatcgcagaagtg
ctcgaaatagaaatgagtgaagtgaaagtaaacctgcaccgcgcgagaaagcaggtacgt
gaacaattacaaaatttgcatgtgtatggaacacagtaa

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