Chitinophaga sp. XS-30: FW415_16185
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Entry
FW415_16185 CDS
T06207
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chit03021
]
FW415_16185
Transcription machinery [BR:
chit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FW415_16185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
DNA_pol3_delta_C
UPF0122
HTH_WhiA
GerE
Motif
Other DBs
NCBI-ProteinID:
QEH42327
UniProt:
A0A5B9WNN3
LinkDB
All DBs
Position
3969653..3970171
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AA seq
172 aa
AA seq
DB search
MSSEVFMTQIMPIKQKLYRFALRLLGNEEDAKDIIQDALIKVWHNKEKMGELQNLEAWCM
RITRNLALDKIKSRKYRMTDDLGRAQEVPASPQHNPHQTAEKSDLMRRVHGLINKLPEKF
RTILQLRDMDGLSYQEIAEVLEIEMSEVKVNLHRARKQVREQLQNLHVYGTQ
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgaagtatttatgactcaaatcatgcctatcaagcagaagctctatcgcttt
gcgcttcgtttgctgggtaatgaggaggatgcgaaggacatcattcaggacgccctgatc
aaagtgtggcacaacaaggaaaaaatgggagaattgcagaacctggaagcatggtgtatg
cgcattacccgcaacctggcgctggacaagatcaaaagccggaaataccggatgaccgat
gatcttggccgggcgcaggaagttccggcaagcccgcagcacaacccgcatcagaccgca
gaaaagagcgatctgatgcgccgggtgcacgggctgatcaataaactgccggagaaattc
cgcacgatcctgcaattgagggatatggatgggttgagttaccaggagatcgcagaagtg
ctcgaaatagaaatgagtgaagtgaaagtaaacctgcaccgcgcgagaaagcaggtacgt
gaacaattacaaaatttgcatgtgtatggaacacagtaa
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