Chitinophaga sp. XS-30: FW415_23400
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Entry
FW415_23400 CDS
T06207
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit00521
Streptomycin biosynthesis
chit00523
Polyketide sugar unit biosynthesis
chit00525
Acarbose and validamycin biosynthesis
chit00541
O-Antigen nucleotide sugar biosynthesis
chit01100
Metabolic pathways
chit01110
Biosynthesis of secondary metabolites
chit01250
Biosynthesis of nucleotide sugars
Module
chit_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FW415_23400 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FW415_23400 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FW415_23400 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FW415_23400 (rfbB)
00525 Acarbose and validamycin biosynthesis
FW415_23400 (rfbB)
Enzymes [BR:
chit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FW415_23400 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
KR
adh_short
Orthopox_F6
Motif
Other DBs
NCBI-ProteinID:
QEH43641
UniProt:
A0A5B9WUI2
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Position
5815938..5816993
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AA seq
351 aa
AA seq
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MKKTLLVTGGAGFIGSHVVRLFVNKYPDYLIVNGDALTYAGNLENLLDIKDQPNYRFEKV
DIVDENAVNALFEKYQFDGVIHLAAESHVDRSILDPLAFIRTNVLGTAVLLNAARKYWKD
DMADKRFYHVSTDEVYGTLGEEGLFTEDTAYDPRSPYSASKASSDHFVRAYYHTYHLPVV
LSNCSNNYGSHHFPEKLIPLAIHNIKNSKPVPVYGKGENVRDWLFVEDHARAIDTIFHNG
RTGETYNIGGFNEWKNIDLIQLLCKVMDEKLGREPGTSAKLITFVKDRAGHDLRYAIDAT
KLNRELGWSPSLQFEEGLERTVDWYLANEEWLQHVTSGAYQQYYETQYQQR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacactccttgtcactggcggcgccggttttatcggctcacacgtcgtgcgg
ctttttgtgaacaaataccccgattacctgatcgtcaacggcgatgcgctcacctatgcc
ggtaacctcgaaaacctgctggatatcaaagaccagcctaactaccggtttgagaaagtg
gacatcgttgacgaaaatgcagtgaacgccctgtttgaaaaataccagttcgatggggtg
atacacctggcggcggaaagccatgtggaccgctccatccttgatcccctggccttcatc
cgtaccaatgtactgggcactgccgtgctgctcaatgccgcccgcaaatactggaaagac
gatatggccgacaaacgtttctatcatgtttccacagacgaggtgtacggcaccctggga
gaagaaggcctcttcacggaggatacggcctacgatccccgctccccctattccgcatcc
aaagccagctccgatcattttgtaagggcttattatcatacttaccatctgccggtagtg
ctgagcaactgctccaacaactacggctctcatcatttcccggagaaactcattcccctc
gccattcacaacatcaaaaacagcaagcccgtgccggtgtacggcaaaggcgagaacgtg
cgcgactggctgttcgtggaagaccatgcacgggccatcgatacgatattccataacgga
cgtaccggggaaacctataacatcggaggcttcaatgaatggaagaacatcgacctgata
caattgctgtgcaaagtgatggatgagaagctgggccgcgaaccgggcacttccgcaaaa
ctcatcacttttgtaaaagaccgcgccgggcatgatctccgctacgcgatagacgccacg
aagctgaaccgggaactgggctggtccccaagcctgcagttcgaagaagggctggaaaga
acggtggactggtacctggccaatgaagaatggctgcagcacgtcaccagcggcgcctac
cagcaatattacgagacacagtaccaacagcgataa
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