Chloroflexus aurantiacus Y-400-fl: Chy400_4248
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Entry
Chy400_4248 CDS
T00859
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
chl
Chloroflexus aurantiacus Y-400-fl
Brite
KEGG Orthology (KO) [BR:
chl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chl03021
]
Chy400_4248
Transcription machinery [BR:
chl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Chy400_4248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_16
HTH_AsnC-type
GerE
Xre-like-HTH
HTH_23
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ACM55602
LinkDB
All DBs
Position
complement(5265148..5265729)
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AA seq
193 aa
AA seq
DB search
MSELQPDETELVARACAGDQSACATIVQRYTGVLYNQAYRMLGDAFEAEDAVQEVFLRAF
RNLQSYDPSRRLVTWLLTIGSNYCIDRLRRRRFNWLTLEDVAFWLPSTQPGPERSALQRA
QQEVVQRALQRLPVTYRGVTVLRYWYDLSYEEIGQVLGLTEATVKTRLHRARKMLQEALA
AEEEVWNIEGMMS
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaattacagcctgatgaaacagagcttgttgctcgtgcctgtgcaggcgatcaa
tcggcctgtgcgaccattgtccagcgttataccggtgttctgtataatcaggcatatcgt
atgctgggtgacgcattcgaggcggaagatgctgttcaagaagtatttcttcgggcattt
cgtaatcttcagagctatgatccgtcgcgccgtttggtaacgtggctgctgacgattggc
tcgaactattgtattgatcgcctgcgtcgccggcgcttcaactggttaacccttgaagat
gtggcattttggctgccgagcacgcagccggggccggagcgaagtgcattgcaacgtgcg
caacaggaggtagtgcagcgggcgctacagcgcctccccgttacctaccgtggagtcacc
gtgttgcgctactggtatgatctgtcgtatgaagagatcggtcaggtgttaggcttgacc
gaagctactgtgaagacccggctgcaccgggcgcgcaagatgttgcaagaggcactcgct
gccgaggaggaggtatggaatatagaggggatgatgagttga
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